Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 MARK2P5-201ENST00000507649 634 ntBASIC13.41□□□□□ -0.26
CCL3P10147 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL3P10147 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL3P10147 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.41□□□□□ -0.26
CCL3P10147 RBM8B-201ENST00000555532 525 ntBASIC13.41□□□□□ -0.26
CCL3P10147 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.41□□□□□ -0.26
CCL3P10147 SNORD3B-2-202ENST00000571722 791 ntBASIC13.41□□□□□ -0.26
CCL3P10147 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL3P10147 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL3P10147 AP000346.4-201ENST00000614827 381 ntBASIC13.41□□□□□ -0.26
CCL3P10147 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL3P10147 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CCL3P10147 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL3P10147 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL3P10147 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CCL3P10147 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL3P10147 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CCL3P10147 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CCL3P10147 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CCL3P10147 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL3P10147 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CCL3P10147 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL3P10147 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL3P10147 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL3P10147 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL3P10147 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL3P10147 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL3P10147 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL3P10147 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL3P10147 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 AC009093.10-201ENST00000641956 1442 ntBASIC13.4□□□□□ -0.26
CCL3P10147 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL3P10147 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CCL3P10147 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CCL3P10147 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL3P10147 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CCL3P10147 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
CCL3P10147 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 CICP24-201ENST00000605464 2705 ntBASIC13.4□□□□□ -0.26
CCL3P10147 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CCL3P10147 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL3P10147 CYP46A4P-201ENST00000414953 267 ntBASIC13.4□□□□□ -0.26
CCL3P10147 AC011742.3-201ENST00000439053 820 ntBASIC13.4□□□□□ -0.26
CCL3P10147 SPTLC1P5-201ENST00000450718 252 ntBASIC13.4□□□□□ -0.26
CCL3P10147 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.4□□□□□ -0.26
CCL3P10147 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.4□□□□□ -0.26
CCL3P10147 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.4□□□□□ -0.26
CCL3P10147 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL3P10147 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.4□□□□□ -0.26
CCL3P10147 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.4□□□□□ -0.26
CCL3P10147 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL3P10147 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL3P10147 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CCL3P10147 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL3P10147 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL3P10147 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL3P10147 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 CYP4F23P-201ENST00000593402 1579 ntBASIC13.4□□□□□ -0.26
CCL3P10147 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL3P10147 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CCL3P10147 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL3P10147 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL3P10147 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL3P10147 INTS4P1-203ENST00000641008 3683 ntBASIC13.4□□□□□ -0.27
CCL3P10147 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
CCL3P10147 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CCL3P10147 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
CCL3P10147 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.39□□□□□ -0.27
CCL3P10147 TUBBP5-203ENST00000508529 1334 ntBASIC13.39□□□□□ -0.27
CCL3P10147 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL3P10147 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL3P10147 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL3P10147 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL3P10147 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL3P10147 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CCL3P10147 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL3P10147 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms