Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AC117489.1-201ENST00000625169 3217 ntBASIC16.22■□□□□ 0.19
CLTAP09496 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLTAP09496 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CLTAP09496 BTBD6P1-201ENST00000412176 1267 ntBASIC16.22■□□□□ 0.19
CLTAP09496 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLTAP09496 HIST2H2BB-201ENST00000449108 381 ntBASIC16.22■□□□□ 0.19
CLTAP09496 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.22■□□□□ 0.19
CLTAP09496 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLTAP09496 AC092658.1-201ENST00000505836 891 ntBASIC16.22■□□□□ 0.19
CLTAP09496 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.22■□□□□ 0.19
CLTAP09496 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.22■□□□□ 0.19
CLTAP09496 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.22■□□□□ 0.19
CLTAP09496 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 AC002472.3-201ENST00000640124 621 ntBASIC16.22■□□□□ 0.19
CLTAP09496 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.22■□□□□ 0.19
CLTAP09496 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.22■□□□□ 0.19
CLTAP09496 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.21■□□□□ 0.19
CLTAP09496 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CLTAP09496 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.21■□□□□ 0.19
CLTAP09496 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.21■□□□□ 0.19
CLTAP09496 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.21■□□□□ 0.19
CLTAP09496 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.21■□□□□ 0.19
CLTAP09496 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.21■□□□□ 0.19
CLTAP09496 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.21■□□□□ 0.19
CLTAP09496 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.21■□□□□ 0.19
CLTAP09496 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CLTAP09496 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 MIR326-201ENST00000362220 95 ntBASIC16.21■□□□□ 0.19
CLTAP09496 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.21■□□□□ 0.19
CLTAP09496 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.21■□□□□ 0.19
CLTAP09496 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 MTX1P1-201ENST00000440904 838 ntBASIC16.21■□□□□ 0.19
CLTAP09496 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLTAP09496 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
CLTAP09496 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.21■□□□□ 0.19
CLTAP09496 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.21■□□□□ 0.19
CLTAP09496 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CLTAP09496 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.21■□□□□ 0.19
CLTAP09496 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.21■□□□□ 0.19
CLTAP09496 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLTAP09496 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CLTAP09496 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLTAP09496 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.21■□□□□ 0.18
CLTAP09496 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.21■□□□□ 0.18
CLTAP09496 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLTAP09496 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CLTAP09496 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CLTAP09496 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLTAP09496 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CLTAP09496 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLTAP09496 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.2■□□□□ 0.18
CLTAP09496 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLTAP09496 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.2■□□□□ 0.18
CLTAP09496 AC018442.1-201ENST00000421439 2061 ntBASIC16.2■□□□□ 0.18
CLTAP09496 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLTAP09496 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLTAP09496 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLTAP09496 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLTAP09496 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLTAP09496 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLTAP09496 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLTAP09496 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLTAP09496 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLTAP09496 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CLTAP09496 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CLTAP09496 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLTAP09496 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLTAP09496 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLTAP09496 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.2■□□□□ 0.18
CLTAP09496 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms