Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS1P07996 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
THBS1P07996 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS1P07996 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.65□□□□□ -0.23
THBS1P07996 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 TCAM1P-207ENST00000485295 1537 ntBASIC13.64□□□□□ -0.23
THBS1P07996 AL359881.3-201ENST00000602640 1721 ntBASIC13.64□□□□□ -0.23
THBS1P07996 BEND3P1-201ENST00000421591 1944 ntBASIC13.64□□□□□ -0.23
THBS1P07996 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
THBS1P07996 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
THBS1P07996 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
THBS1P07996 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 AC016397.2-201ENST00000624848 1985 ntBASIC13.64□□□□□ -0.23
THBS1P07996 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
THBS1P07996 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
THBS1P07996 AL590440.2-201ENST00000641973 1595 ntBASIC13.64□□□□□ -0.23
THBS1P07996 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
THBS1P07996 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.64□□□□□ -0.23
THBS1P07996 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.64□□□□□ -0.23
THBS1P07996 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.64□□□□□ -0.23
THBS1P07996 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.64□□□□□ -0.23
THBS1P07996 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.64□□□□□ -0.23
THBS1P07996 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.64□□□□□ -0.23
THBS1P07996 AL355864.2-201ENST00000447420 863 ntBASIC13.64□□□□□ -0.23
THBS1P07996 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.64□□□□□ -0.23
THBS1P07996 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.64□□□□□ -0.23
THBS1P07996 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC13.64□□□□□ -0.23
THBS1P07996 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.64□□□□□ -0.23
THBS1P07996 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 AL928921.2-201ENST00000641325 2442 ntBASIC13.64□□□□□ -0.23
THBS1P07996 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
THBS1P07996 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
THBS1P07996 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THBS1P07996 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
THBS1P07996 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.63□□□□□ -0.23
THBS1P07996 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
THBS1P07996 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
THBS1P07996 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.63□□□□□ -0.23
THBS1P07996 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
THBS1P07996 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 TPM3P8-201ENST00000330554 643 ntBASIC13.63□□□□□ -0.23
THBS1P07996 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
THBS1P07996 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.63□□□□□ -0.23
THBS1P07996 AC005229.1-201ENST00000392885 409 ntBASIC13.63□□□□□ -0.23
THBS1P07996 RN7SKP175-201ENST00000408472 289 ntBASIC13.63□□□□□ -0.23
THBS1P07996 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.63□□□□□ -0.23
THBS1P07996 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.63□□□□□ -0.23
THBS1P07996 PUDPP3-201ENST00000445368 636 ntBASIC13.63□□□□□ -0.23
THBS1P07996 ACA64.2-201ENST00000459014 129 ntBASIC13.63□□□□□ -0.23
THBS1P07996 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.63□□□□□ -0.23
THBS1P07996 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.63□□□□□ -0.23
THBS1P07996 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.63□□□□□ -0.23
THBS1P07996 AP001889.1-201ENST00000525414 633 ntBASIC13.63□□□□□ -0.23
THBS1P07996 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 COA4-204ENST00000541455 1038 ntTSL 5 BASIC13.63□□□□□ -0.23
THBS1P07996 HILS1-202ENST00000545329 423 ntBASIC13.63□□□□□ -0.23
THBS1P07996 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.63□□□□□ -0.23
THBS1P07996 AC025279.2-201ENST00000569730 653 ntBASIC13.63□□□□□ -0.23
THBS1P07996 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.63□□□□□ -0.23
THBS1P07996 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
THBS1P07996 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS1P07996 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms