Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
MT-ND3P03897 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
MT-ND3P03897 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.17■□□□□ 0.02
MT-ND3P03897 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.17■□□□□ 0.02
MT-ND3P03897 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MT-ND3P03897 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.17■□□□□ 0.02
MT-ND3P03897 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.16■□□□□ 0.02
MT-ND3P03897 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
MT-ND3P03897 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
MT-ND3P03897 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
MT-ND3P03897 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 ATP5G2P4-201ENST00000442175 420 ntBASIC15.16■□□□□ 0.02
MT-ND3P03897 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
MT-ND3P03897 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.16■□□□□ 0.02
MT-ND3P03897 INE1-201ENST00000456273 945 ntBASIC15.16■□□□□ 0.02
MT-ND3P03897 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 AC104596.2-201ENST00000512793 793 ntBASIC15.16■□□□□ 0.02
MT-ND3P03897 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.16■□□□□ 0.02
MT-ND3P03897 AC123567.1-201ENST00000548294 1261 ntBASIC15.16■□□□□ 0.02
MT-ND3P03897 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.16■□□□□ 0.02
MT-ND3P03897 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.16■□□□□ 0.02
MT-ND3P03897 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.16■□□□□ 0.02
MT-ND3P03897 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
MT-ND3P03897 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.16■□□□□ 0.02
MT-ND3P03897 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 AGGF1P1-201ENST00000509500 2073 ntBASIC15.16■□□□□ 0.02
MT-ND3P03897 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.16■□□□□ 0.02
MT-ND3P03897 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.16■□□□□ 0.02
MT-ND3P03897 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
MT-ND3P03897 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.16■□□□□ 0.02
MT-ND3P03897 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.16■□□□□ 0.02
MT-ND3P03897 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.16■□□□□ 0.02
MT-ND3P03897 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-ND3P03897 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.15■□□□□ 0.02
MT-ND3P03897 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MT-ND3P03897 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.15■□□□□ 0.02
MT-ND3P03897 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.15■□□□□ 0.02
MT-ND3P03897 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.15■□□□□ 0.02
MT-ND3P03897 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-ND3P03897 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
MT-ND3P03897 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-ND3P03897 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-ND3P03897 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-ND3P03897 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
MT-ND3P03897 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-ND3P03897 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-ND3P03897 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.15■□□□□ 0.02
MT-ND3P03897 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.15■□□□□ 0.02
MT-ND3P03897 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
MT-ND3P03897 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MT-ND3P03897 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MT-ND3P03897 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.15■□□□□ 0.02
MT-ND3P03897 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.15■□□□□ 0.02
MT-ND3P03897 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MT-ND3P03897 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.15■□□□□ 0.02
MT-ND3P03897 AC023310.3-201ENST00000557027 670 ntBASIC15.15■□□□□ 0.02
MT-ND3P03897 AC100756.1-201ENST00000562736 682 ntBASIC15.15■□□□□ 0.02
MT-ND3P03897 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
MT-ND3P03897 AC138749.3-201ENST00000567691 622 ntBASIC15.15■□□□□ 0.02
MT-ND3P03897 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.15■□□□□ 0.02
MT-ND3P03897 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.15■□□□□ 0.02
MT-ND3P03897 AC116165.1-201ENST00000611806 668 ntBASIC15.15■□□□□ 0.02
MT-ND3P03897 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.15■□□□□ 0.02
MT-ND3P03897 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MT-ND3P03897 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-ND3P03897 PEG13-201ENST00000631594 5667 ntBASIC15.15■□□□□ 0.02
MT-ND3P03897 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms