Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.66■□□□□ 0.1
TIMP1P01033 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.66■□□□□ 0.1
TIMP1P01033 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TIMP1P01033 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TIMP1P01033 CICP23-201ENST00000605013 2741 ntBASIC15.66■□□□□ 0.1
TIMP1P01033 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.66■□□□□ 0.1
TIMP1P01033 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.66■□□□□ 0.1
TIMP1P01033 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.65■□□□□ 0.1
TIMP1P01033 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.65■□□□□ 0.1
TIMP1P01033 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.65■□□□□ 0.1
TIMP1P01033 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TIMP1P01033 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TIMP1P01033 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.65■□□□□ 0.1
TIMP1P01033 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.65■□□□□ 0.1
TIMP1P01033 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.65■□□□□ 0.1
TIMP1P01033 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
TIMP1P01033 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TIMP1P01033 UROS-201ENST00000368774 744 ntTSL 2 BASIC15.65■□□□□ 0.1
TIMP1P01033 AP000354.1-201ENST00000396982 456 ntBASIC15.65■□□□□ 0.1
TIMP1P01033 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TIMP1P01033 SERBP1P2-201ENST00000436888 1164 ntBASIC15.65■□□□□ 0.1
TIMP1P01033 AL451000.1-201ENST00000451300 1186 ntBASIC15.65■□□□□ 0.1
TIMP1P01033 AC006529.1-201ENST00000459978 637 ntBASIC15.65■□□□□ 0.1
TIMP1P01033 RN7SL375P-201ENST00000492442 298 ntBASIC15.65■□□□□ 0.1
TIMP1P01033 RPS23-207ENST00000511844 530 ntTSL 2 BASIC15.65■□□□□ 0.1
TIMP1P01033 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC15.65■□□□□ 0.1
TIMP1P01033 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC15.65■□□□□ 0.1
TIMP1P01033 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TIMP1P01033 MT2A-202ENST00000561491 581 ntTSL 2 BASIC15.65■□□□□ 0.1
TIMP1P01033 NAV1-210ENST00000593583 726 ntBASIC15.65■□□□□ 0.1
TIMP1P01033 AL359091.4-201ENST00000610052 409 ntBASIC15.65■□□□□ 0.1
TIMP1P01033 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.65■□□□□ 0.1
TIMP1P01033 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.65■□□□□ 0.1
TIMP1P01033 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.65■□□□□ 0.1
TIMP1P01033 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.65■□□□□ 0.1
TIMP1P01033 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TIMP1P01033 ENPP7P8-202ENST00000527856 1345 ntBASIC15.65■□□□□ 0.1
TIMP1P01033 LAP3P2-201ENST00000454686 1454 ntBASIC15.65■□□□□ 0.1
TIMP1P01033 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 AC015688.4-201ENST00000580780 1647 ntBASIC15.65■□□□□ 0.1
TIMP1P01033 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMP1P01033 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
TIMP1P01033 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
TIMP1P01033 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 MSANTD2P1-201ENST00000445341 1368 ntBASIC15.64■□□□□ 0.09
TIMP1P01033 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TIMP1P01033 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.64■□□□□ 0.09
TIMP1P01033 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
TIMP1P01033 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 PTGER4P2-201ENST00000328411 252 ntBASIC15.64■□□□□ 0.09
TIMP1P01033 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.64■□□□□ 0.09
TIMP1P01033 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TIMP1P01033 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.64■□□□□ 0.09
TIMP1P01033 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC15.64■□□□□ 0.09
TIMP1P01033 PTGER4P3-201ENST00000458150 252 ntBASIC15.64■□□□□ 0.09
TIMP1P01033 VENTXP3-201ENST00000546480 773 ntBASIC15.64■□□□□ 0.09
TIMP1P01033 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC15.64■□□□□ 0.09
TIMP1P01033 AP005264.5-201ENST00000590066 467 ntBASIC15.64■□□□□ 0.09
TIMP1P01033 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TIMP1P01033 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC15.64■□□□□ 0.09
TIMP1P01033 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMP1P01033 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms