Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC21.52■■□□□ 1.04
RAPGEF3O95398 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAPGEF3O95398 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RAPGEF3O95398 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF3O95398 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF3O95398 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC21.51■■□□□ 1.03
RAPGEF3O95398 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF3O95398 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF3O95398 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RAPGEF3O95398 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC21.51■■□□□ 1.03
RAPGEF3O95398 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF3O95398 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.51■■□□□ 1.03
RAPGEF3O95398 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RAPGEF3O95398 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF3O95398 HNRNPA1P21-201ENST00000424115 961 ntBASIC21.51■■□□□ 1.03
RAPGEF3O95398 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC21.51■■□□□ 1.03
RAPGEF3O95398 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC21.51■■□□□ 1.03
RAPGEF3O95398 AC079414.2-201ENST00000567157 1104 ntBASIC21.51■■□□□ 1.03
RAPGEF3O95398 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC21.51■■□□□ 1.03
RAPGEF3O95398 AC126755.5-201ENST00000622756 267 ntBASIC21.51■■□□□ 1.03
RAPGEF3O95398 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC21.51■■□□□ 1.03
RAPGEF3O95398 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF3O95398 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC21.51■■□□□ 1.03
RAPGEF3O95398 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF3O95398 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
RAPGEF3O95398 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF3O95398 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC21.51■■□□□ 1.03
RAPGEF3O95398 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF3O95398 WARS-232ENST00000556645 2508 ntTSL 5 BASIC21.51■■□□□ 1.03
RAPGEF3O95398 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF3O95398 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF3O95398 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF3O95398 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF3O95398 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF3O95398 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF3O95398 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
RAPGEF3O95398 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF3O95398 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF3O95398 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC21.5■■□□□ 1.03
RAPGEF3O95398 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF3O95398 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF3O95398 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC21.5■■□□□ 1.03
RAPGEF3O95398 FAM197Y6-201ENST00000420524 766 ntBASIC21.5■■□□□ 1.03
RAPGEF3O95398 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC21.5■■□□□ 1.03
RAPGEF3O95398 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC21.5■■□□□ 1.03
RAPGEF3O95398 ACY3-202ENST00000529256 933 ntTSL 3 BASIC21.5■■□□□ 1.03
RAPGEF3O95398 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF3O95398 BATF-202ENST00000555504 361 ntTSL 2 BASIC21.5■■□□□ 1.03
RAPGEF3O95398 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC21.5■■□□□ 1.03
RAPGEF3O95398 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RAPGEF3O95398 PRMT1P1-201ENST00000604252 1009 ntBASIC21.5■■□□□ 1.03
RAPGEF3O95398 AC020904.3-201ENST00000624199 442 ntBASIC21.5■■□□□ 1.03
RAPGEF3O95398 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
RAPGEF3O95398 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC21.5■■□□□ 1.03
RAPGEF3O95398 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC21.5■■□□□ 1.03
RAPGEF3O95398 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF3O95398 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF3O95398 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC21.5■■□□□ 1.03
RAPGEF3O95398 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF3O95398 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC21.5■■□□□ 1.03
RAPGEF3O95398 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RAPGEF3O95398 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF3O95398 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF3O95398 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF3O95398 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF3O95398 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF3O95398 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF3O95398 AC015688.4-201ENST00000580780 1647 ntBASIC21.49■■□□□ 1.03
RAPGEF3O95398 LTB4R2-202ENST00000528054 3092 ntBASIC21.49■■□□□ 1.03
RAPGEF3O95398 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RAPGEF3O95398 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC21.49■■□□□ 1.03
RAPGEF3O95398 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC21.49■■□□□ 1.03
RAPGEF3O95398 KRT18P62-201ENST00000446618 1287 ntBASIC21.49■■□□□ 1.03
RAPGEF3O95398 AC108724.1-201ENST00000481669 352 ntBASIC21.49■■□□□ 1.03
RAPGEF3O95398 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC21.49■■□□□ 1.03
RAPGEF3O95398 HNRNPA1P56-201ENST00000505767 954 ntBASIC21.49■■□□□ 1.03
RAPGEF3O95398 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC21.49■■□□□ 1.03
RAPGEF3O95398 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC21.49■■□□□ 1.03
RAPGEF3O95398 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC21.49■■□□□ 1.03
RAPGEF3O95398 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC21.49■■□□□ 1.03
RAPGEF3O95398 MIR4746-201ENST00000579802 71 ntBASIC21.49■■□□□ 1.03
RAPGEF3O95398 AC026336.4-201ENST00000624565 1050 ntBASIC21.49■■□□□ 1.03
RAPGEF3O95398 ESR1-214ENST00000638569 132 ntTSL 5 BASIC21.49■■□□□ 1.03
RAPGEF3O95398 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF3O95398 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF3O95398 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF3O95398 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
RAPGEF3O95398 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF3O95398 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF3O95398 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF3O95398 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RAPGEF3O95398 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF3O95398 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
RAPGEF3O95398 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RAPGEF3O95398 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RAPGEF3O95398 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
RAPGEF3O95398 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RAPGEF3O95398 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms