Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LTN1O94822 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.99■□□□□ 0.63
LTN1O94822 SAT1-201ENST00000379251 801 ntTSL 2 BASIC18.99■□□□□ 0.63
LTN1O94822 SAT1-202ENST00000379253 909 ntTSL 2 BASIC18.99■□□□□ 0.63
LTN1O94822 SAT1-203ENST00000379254 868 ntTSL 3 BASIC18.99■□□□□ 0.63
LTN1O94822 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LTN1O94822 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC18.99■□□□□ 0.63
LTN1O94822 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC18.99■□□□□ 0.63
LTN1O94822 AC244197.1-201ENST00000456494 951 ntBASIC18.99■□□□□ 0.63
LTN1O94822 ALG1L3P-201ENST00000503331 765 ntBASIC18.99■□□□□ 0.63
LTN1O94822 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC18.99■□□□□ 0.63
LTN1O94822 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LTN1O94822 HMGB1P24-201ENST00000611897 328 ntBASIC18.99■□□□□ 0.63
LTN1O94822 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LTN1O94822 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC18.99■□□□□ 0.63
LTN1O94822 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LTN1O94822 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LTN1O94822 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LTN1O94822 AL672207.1-201ENST00000328462 1570 ntBASIC18.99■□□□□ 0.63
LTN1O94822 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC18.99■□□□□ 0.63
LTN1O94822 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.99■□□□□ 0.63
LTN1O94822 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LTN1O94822 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LTN1O94822 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC18.99■□□□□ 0.63
LTN1O94822 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC18.99■□□□□ 0.63
LTN1O94822 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC18.99■□□□□ 0.63
LTN1O94822 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LTN1O94822 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.99■□□□□ 0.63
LTN1O94822 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.99■□□□□ 0.63
LTN1O94822 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
LTN1O94822 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LTN1O94822 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LTN1O94822 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LTN1O94822 GEMIN8P4-201ENST00000380526 729 ntBASIC18.98■□□□□ 0.63
LTN1O94822 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LTN1O94822 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.98■□□□□ 0.63
LTN1O94822 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LTN1O94822 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC18.98■□□□□ 0.63
LTN1O94822 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC18.98■□□□□ 0.63
LTN1O94822 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.98■□□□□ 0.63
LTN1O94822 DNM1P51-201ENST00000558149 522 ntBASIC18.98■□□□□ 0.63
LTN1O94822 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC18.98■□□□□ 0.63
LTN1O94822 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC18.98■□□□□ 0.63
LTN1O94822 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC18.98■□□□□ 0.63
LTN1O94822 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LTN1O94822 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LTN1O94822 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.98■□□□□ 0.63
LTN1O94822 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LTN1O94822 FUCA1P1-201ENST00000374476 1351 ntBASIC18.98■□□□□ 0.63
LTN1O94822 RN7SL832P-201ENST00000607781 1756 ntBASIC18.98■□□□□ 0.63
LTN1O94822 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC18.98■□□□□ 0.63
LTN1O94822 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC18.98■□□□□ 0.63
LTN1O94822 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
LTN1O94822 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LTN1O94822 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LTN1O94822 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LTN1O94822 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.98■□□□□ 0.63
LTN1O94822 AC090505.1-201ENST00000430515 1834 ntBASIC18.98■□□□□ 0.63
LTN1O94822 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC18.98■□□□□ 0.63
LTN1O94822 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LTN1O94822 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC18.98■□□□□ 0.63
LTN1O94822 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.98■□□□□ 0.63
LTN1O94822 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LTN1O94822 SURF4-203ENST00000371991 715 ntTSL 3 BASIC18.98■□□□□ 0.63
LTN1O94822 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LTN1O94822 AQP7P5-201ENST00000428759 1049 ntBASIC18.98■□□□□ 0.63
LTN1O94822 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC18.98■□□□□ 0.63
LTN1O94822 AQP7P4-201ENST00000447083 1042 ntBASIC18.98■□□□□ 0.63
LTN1O94822 AQP7P2-201ENST00000453967 1041 ntBASIC18.98■□□□□ 0.63
LTN1O94822 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.98■□□□□ 0.63
LTN1O94822 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC18.98■□□□□ 0.63
LTN1O94822 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
LTN1O94822 AQP7P3-201ENST00000624547 1041 ntBASIC18.98■□□□□ 0.63
LTN1O94822 RARS-210ENST00000626454 177 ntTSL 5 BASIC18.98■□□□□ 0.63
LTN1O94822 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LTN1O94822 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
LTN1O94822 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LTN1O94822 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.98■□□□□ 0.63
LTN1O94822 AC092384.3-202ENST00000564646 2873 ntBASIC18.98■□□□□ 0.63
LTN1O94822 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC18.98■□□□□ 0.63
LTN1O94822 CICP14-201ENST00000629111 2732 ntBASIC18.98■□□□□ 0.63
LTN1O94822 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC18.97■□□□□ 0.63
LTN1O94822 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LTN1O94822 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LTN1O94822 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC18.97■□□□□ 0.63
LTN1O94822 DUT-208ENST00000559540 1441 ntTSL 2 BASIC18.97■□□□□ 0.63
LTN1O94822 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
LTN1O94822 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LTN1O94822 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LTN1O94822 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LTN1O94822 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC18.97■□□□□ 0.63
LTN1O94822 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC18.97■□□□□ 0.63
LTN1O94822 RPL35P9-201ENST00000446059 350 ntBASIC18.97■□□□□ 0.63
LTN1O94822 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LTN1O94822 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LTN1O94822 AL135901.1-201ENST00000451812 333 ntBASIC18.97■□□□□ 0.63
LTN1O94822 AREG-202ENST00000502307 956 ntTSL 5 BASIC18.97■□□□□ 0.63
LTN1O94822 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC18.97■□□□□ 0.63
LTN1O94822 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC18.97■□□□□ 0.63
LTN1O94822 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms