Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CLN5O75503 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CLN5O75503 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CLN5O75503 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.2□□□□□ -0.46
CLN5O75503 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CLN5O75503 TARDBPP1-201ENST00000442013 1203 ntBASIC12.2□□□□□ -0.46
CLN5O75503 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.2□□□□□ -0.46
CLN5O75503 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.2□□□□□ -0.46
CLN5O75503 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.2□□□□□ -0.46
CLN5O75503 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.2□□□□□ -0.46
CLN5O75503 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CLN5O75503 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.2□□□□□ -0.46
CLN5O75503 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 MIR6080-201ENST00000617359 66 ntBASIC12.2□□□□□ -0.46
CLN5O75503 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CLN5O75503 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.2□□□□□ -0.46
CLN5O75503 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CLN5O75503 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.2□□□□□ -0.46
CLN5O75503 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.2□□□□□ -0.46
CLN5O75503 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CLN5O75503 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CLN5O75503 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.2□□□□□ -0.46
CLN5O75503 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CLN5O75503 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLN5O75503 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CLN5O75503 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
CLN5O75503 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CLN5O75503 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.19□□□□□ -0.46
CLN5O75503 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.19□□□□□ -0.46
CLN5O75503 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CLN5O75503 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CLN5O75503 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CLN5O75503 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.19□□□□□ -0.46
CLN5O75503 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
CLN5O75503 AC004241.5-201ENST00000623870 2448 ntBASIC12.19□□□□□ -0.46
CLN5O75503 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.19□□□□□ -0.46
CLN5O75503 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.19□□□□□ -0.46
CLN5O75503 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CLN5O75503 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.19□□□□□ -0.46
CLN5O75503 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CLN5O75503 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.19□□□□□ -0.46
CLN5O75503 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.19□□□□□ -0.46
CLN5O75503 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.19□□□□□ -0.46
CLN5O75503 SERBP1P3-201ENST00000459980 809 ntBASIC12.19□□□□□ -0.46
CLN5O75503 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.19□□□□□ -0.46
CLN5O75503 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.19□□□□□ -0.46
CLN5O75503 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.19□□□□□ -0.46
CLN5O75503 AL079307.3-201ENST00000556114 283 ntBASIC12.19□□□□□ -0.46
CLN5O75503 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.19□□□□□ -0.46
CLN5O75503 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CLN5O75503 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.19□□□□□ -0.46
CLN5O75503 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.19□□□□□ -0.46
CLN5O75503 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.19□□□□□ -0.46
CLN5O75503 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 AC010327.4-202ENST00000591484 748 ntBASIC12.19□□□□□ -0.46
CLN5O75503 AP001059.3-201ENST00000619053 235 ntBASIC12.19□□□□□ -0.46
CLN5O75503 MIR6069-201ENST00000620069 79 ntBASIC12.19□□□□□ -0.46
CLN5O75503 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.19□□□□□ -0.46
CLN5O75503 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.19□□□□□ -0.46
CLN5O75503 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLN5O75503 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms