Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC11.62□□□□□ -0.55
ZNF253O75346 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ZNF253O75346 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC11.62□□□□□ -0.55
ZNF253O75346 AC004066.1-201ENST00000502488 802 ntBASIC11.62□□□□□ -0.55
ZNF253O75346 SDHAP3-202ENST00000515467 728 ntBASIC11.62□□□□□ -0.55
ZNF253O75346 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC11.62□□□□□ -0.55
ZNF253O75346 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.62□□□□□ -0.55
ZNF253O75346 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.62□□□□□ -0.55
ZNF253O75346 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
ZNF253O75346 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.62□□□□□ -0.55
ZNF253O75346 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC11.62□□□□□ -0.55
ZNF253O75346 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ZNF253O75346 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ZNF253O75346 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ZNF253O75346 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ZNF253O75346 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ZNF253O75346 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ZNF253O75346 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ZNF253O75346 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ZNF253O75346 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ZNF253O75346 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
ZNF253O75346 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ZNF253O75346 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
ZNF253O75346 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ZNF253O75346 AC019294.4-201ENST00000561777 2905 ntBASIC11.62□□□□□ -0.55
ZNF253O75346 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ZNF253O75346 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ZNF253O75346 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
ZNF253O75346 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.62□□□□□ -0.55
ZNF253O75346 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
ZNF253O75346 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ZNF253O75346 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.62□□□□□ -0.55
ZNF253O75346 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC11.62□□□□□ -0.55
ZNF253O75346 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ZNF253O75346 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.61□□□□□ -0.55
ZNF253O75346 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.61□□□□□ -0.55
ZNF253O75346 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 AC015802.1-201ENST00000588104 1449 ntBASIC11.61□□□□□ -0.55
ZNF253O75346 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.61□□□□□ -0.55
ZNF253O75346 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
ZNF253O75346 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.61□□□□□ -0.55
ZNF253O75346 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.61□□□□□ -0.55
ZNF253O75346 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.61□□□□□ -0.55
ZNF253O75346 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.61□□□□□ -0.55
ZNF253O75346 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ZNF253O75346 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC11.61□□□□□ -0.55
ZNF253O75346 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.61□□□□□ -0.55
ZNF253O75346 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC11.61□□□□□ -0.55
ZNF253O75346 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.61□□□□□ -0.55
ZNF253O75346 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC11.61□□□□□ -0.55
ZNF253O75346 RN7SL618P-201ENST00000477850 296 ntBASIC11.61□□□□□ -0.55
ZNF253O75346 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC11.61□□□□□ -0.55
ZNF253O75346 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC11.61□□□□□ -0.55
ZNF253O75346 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.61□□□□□ -0.55
ZNF253O75346 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 MIR3687-2-201ENST00000577708 61 ntBASIC11.61□□□□□ -0.55
ZNF253O75346 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.61□□□□□ -0.55
ZNF253O75346 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC11.61□□□□□ -0.55
ZNF253O75346 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.61□□□□□ -0.55
ZNF253O75346 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 MIR3687-1-201ENST00000614492 61 ntBASIC11.61□□□□□ -0.55
ZNF253O75346 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC11.61□□□□□ -0.55
ZNF253O75346 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.61□□□□□ -0.55
ZNF253O75346 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ZNF253O75346 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 AC083964.2-201ENST00000623988 2396 ntBASIC11.61□□□□□ -0.55
ZNF253O75346 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ZNF253O75346 MEX3B-202ENST00000558133 4333 ntBASIC11.61□□□□□ -0.55
ZNF253O75346 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
ZNF253O75346 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
ZNF253O75346 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.6□□□□□ -0.55
ZNF253O75346 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.6□□□□□ -0.55
ZNF253O75346 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
ZNF253O75346 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms