Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.92□□□□□ -0.18
HCN1O60741 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
HCN1O60741 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HCN1O60741 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.92□□□□□ -0.18
HCN1O60741 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
HCN1O60741 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.92□□□□□ -0.18
HCN1O60741 AL645937.2-201ENST00000396808 931 ntBASIC13.92□□□□□ -0.18
HCN1O60741 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.92□□□□□ -0.18
HCN1O60741 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 AC114812.1-204ENST00000449669 728 ntBASIC13.92□□□□□ -0.18
HCN1O60741 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HCN1O60741 FTH1P14-201ENST00000482930 551 ntBASIC13.92□□□□□ -0.18
HCN1O60741 AC106760.1-201ENST00000508690 800 ntBASIC13.92□□□□□ -0.18
HCN1O60741 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.92□□□□□ -0.18
HCN1O60741 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.92□□□□□ -0.18
HCN1O60741 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.92□□□□□ -0.18
HCN1O60741 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.92□□□□□ -0.18
HCN1O60741 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.92□□□□□ -0.18
HCN1O60741 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.92□□□□□ -0.18
HCN1O60741 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.92□□□□□ -0.18
HCN1O60741 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.92□□□□□ -0.18
HCN1O60741 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HCN1O60741 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.92□□□□□ -0.18
HCN1O60741 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HCN1O60741 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HCN1O60741 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.92□□□□□ -0.18
HCN1O60741 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.92□□□□□ -0.18
HCN1O60741 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HCN1O60741 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.91□□□□□ -0.18
HCN1O60741 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
HCN1O60741 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.91□□□□□ -0.18
HCN1O60741 AC079781.5-202ENST00000641784 3743 ntBASIC13.91□□□□□ -0.18
HCN1O60741 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HCN1O60741 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.91□□□□□ -0.18
HCN1O60741 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.91□□□□□ -0.18
HCN1O60741 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.91□□□□□ -0.18
HCN1O60741 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
HCN1O60741 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.91□□□□□ -0.18
HCN1O60741 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HCN1O60741 MSTO2P-201ENST00000314835 1709 ntBASIC13.91□□□□□ -0.18
HCN1O60741 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HCN1O60741 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.91□□□□□ -0.18
HCN1O60741 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.91□□□□□ -0.18
HCN1O60741 HLA-V-201ENST00000429037 534 ntBASIC13.91□□□□□ -0.18
HCN1O60741 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.91□□□□□ -0.18
HCN1O60741 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.91□□□□□ -0.18
HCN1O60741 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.91□□□□□ -0.18
HCN1O60741 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.91□□□□□ -0.18
HCN1O60741 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.91□□□□□ -0.18
HCN1O60741 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.91□□□□□ -0.18
HCN1O60741 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.91□□□□□ -0.18
HCN1O60741 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.91□□□□□ -0.18
HCN1O60741 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.91□□□□□ -0.18
HCN1O60741 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.91□□□□□ -0.18
HCN1O60741 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
HCN1O60741 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HCN1O60741 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.91□□□□□ -0.18
HCN1O60741 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.91□□□□□ -0.18
HCN1O60741 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.91□□□□□ -0.18
HCN1O60741 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.91□□□□□ -0.18
HCN1O60741 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCN1O60741 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 KRT8P35-201ENST00000483942 1338 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms