Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
KDELR3O43731 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.93□□□□□ -0.02
KDELR3O43731 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.93□□□□□ -0.02
KDELR3O43731 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.93□□□□□ -0.02
KDELR3O43731 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.93□□□□□ -0.02
KDELR3O43731 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.93□□□□□ -0.02
KDELR3O43731 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
KDELR3O43731 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.93□□□□□ -0.02
KDELR3O43731 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.93□□□□□ -0.02
KDELR3O43731 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.93□□□□□ -0.02
KDELR3O43731 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.93□□□□□ -0.02
KDELR3O43731 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.93□□□□□ -0.02
KDELR3O43731 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.93□□□□□ -0.02
KDELR3O43731 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.93□□□□□ -0.02
KDELR3O43731 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 RBM8B-201ENST00000555532 525 ntBASIC14.93□□□□□ -0.02
KDELR3O43731 SORD2P-201ENST00000558556 1069 ntBASIC14.93□□□□□ -0.02
KDELR3O43731 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.93□□□□□ -0.02
KDELR3O43731 RN7SL163P-201ENST00000583100 276 ntBASIC14.93□□□□□ -0.02
KDELR3O43731 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.93□□□□□ -0.02
KDELR3O43731 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.93□□□□□ -0.02
KDELR3O43731 AP000346.4-201ENST00000614827 381 ntBASIC14.93□□□□□ -0.02
KDELR3O43731 AC004923.1-202ENST00000642106 209 ntBASIC14.93□□□□□ -0.02
KDELR3O43731 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.93□□□□□ -0.02
KDELR3O43731 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.93□□□□□ -0.02
KDELR3O43731 MYO15B-237ENST00000642007 4893 ntBASIC14.93□□□□□ -0.02
KDELR3O43731 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
KDELR3O43731 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
KDELR3O43731 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.93□□□□□ -0.02
KDELR3O43731 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
KDELR3O43731 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
KDELR3O43731 AC099063.4-201ENST00000641099 1602 ntBASIC14.92□□□□□ -0.02
KDELR3O43731 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.92□□□□□ -0.02
KDELR3O43731 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.92□□□□□ -0.02
KDELR3O43731 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.92□□□□□ -0.02
KDELR3O43731 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.92□□□□□ -0.02
KDELR3O43731 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
KDELR3O43731 DPM3-202ENST00000368399 517 ntBASIC14.92□□□□□ -0.02
KDELR3O43731 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.92□□□□□ -0.02
KDELR3O43731 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.92□□□□□ -0.02
KDELR3O43731 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.92□□□□□ -0.02
KDELR3O43731 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.92□□□□□ -0.02
KDELR3O43731 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 AP001258.2-201ENST00000529891 490 ntBASIC14.92□□□□□ -0.02
KDELR3O43731 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.92□□□□□ -0.02
KDELR3O43731 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.92□□□□□ -0.02
KDELR3O43731 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.92□□□□□ -0.02
KDELR3O43731 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
KDELR3O43731 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
KDELR3O43731 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
KDELR3O43731 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
KDELR3O43731 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 MBLAC2-202ENST00000514906 1936 ntBASIC14.92□□□□□ -0.02
KDELR3O43731 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
KDELR3O43731 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDELR3O43731 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.91□□□□□ -0.02
KDELR3O43731 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDELR3O43731 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.91□□□□□ -0.02
KDELR3O43731 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDELR3O43731 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
KDELR3O43731 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.91□□□□□ -0.02
KDELR3O43731 AC144522.1-201ENST00000625111 1658 ntBASIC14.91□□□□□ -0.02
KDELR3O43731 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.91□□□□□ -0.02
KDELR3O43731 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDELR3O43731 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDELR3O43731 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDELR3O43731 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
KDELR3O43731 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms