Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXA2O43364 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.69■□□□□ 0.1
HOXA2O43364 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXA2O43364 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXA2O43364 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXA2O43364 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXA2O43364 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXA2O43364 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXA2O43364 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HOXA2O43364 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.68■□□□□ 0.1
HOXA2O43364 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.68■□□□□ 0.1
HOXA2O43364 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.68■□□□□ 0.1
HOXA2O43364 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXA2O43364 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXA2O43364 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 AC135983.4-201ENST00000564116 1262 ntBASIC15.68■□□□□ 0.1
HOXA2O43364 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
HOXA2O43364 AC007881.3-201ENST00000608897 607 ntBASIC15.68■□□□□ 0.1
HOXA2O43364 AC009560.1-201ENST00000620208 434 ntBASIC15.68■□□□□ 0.1
HOXA2O43364 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXA2O43364 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HOXA2O43364 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXA2O43364 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXA2O43364 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA2O43364 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA2O43364 CICP23-201ENST00000605013 2741 ntBASIC15.67■□□□□ 0.1
HOXA2O43364 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA2O43364 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.67■□□□□ 0.1
HOXA2O43364 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA2O43364 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA2O43364 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA2O43364 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.67■□□□□ 0.1
HOXA2O43364 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA2O43364 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HOXA2O43364 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.67■□□□□ 0.1
HOXA2O43364 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA2O43364 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.67■□□□□ 0.1
HOXA2O43364 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.67■□□□□ 0.1
HOXA2O43364 FTH1P22-201ENST00000456305 520 ntBASIC15.67■□□□□ 0.1
HOXA2O43364 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.67■□□□□ 0.1
HOXA2O43364 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.67■□□□□ 0.1
HOXA2O43364 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.67■□□□□ 0.1
HOXA2O43364 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA2O43364 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA2O43364 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA2O43364 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.67■□□□□ 0.1
HOXA2O43364 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.67■□□□□ 0.1
HOXA2O43364 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.67■□□□□ 0.1
HOXA2O43364 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.67■□□□□ 0.1
HOXA2O43364 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA2O43364 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.67■□□□□ 0.1
HOXA2O43364 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA2O43364 AC138035.3-201ENST00000622706 2791 ntBASIC15.67■□□□□ 0.1
HOXA2O43364 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HOXA2O43364 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA2O43364 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA2O43364 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA2O43364 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA2O43364 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.67■□□□□ 0.1
HOXA2O43364 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.67■□□□□ 0.1
HOXA2O43364 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HOXA2O43364 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXA2O43364 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HOXA2O43364 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HOXA2O43364 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXA2O43364 AC015688.4-201ENST00000580780 1647 ntBASIC15.66■□□□□ 0.1
HOXA2O43364 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
HOXA2O43364 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HOXA2O43364 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXA2O43364 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.66■□□□□ 0.1
HOXA2O43364 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms