Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.16□□□□□ -0.14
CLOCKO15516 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CLOCKO15516 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.16□□□□□ -0.14
CLOCKO15516 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.16□□□□□ -0.14
CLOCKO15516 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CLOCKO15516 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CLOCKO15516 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CLOCKO15516 LINC02560-201ENST00000596379 459 ntBASIC14.16□□□□□ -0.14
CLOCKO15516 AL138828.2-201ENST00000615812 383 ntBASIC14.16□□□□□ -0.14
CLOCKO15516 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLOCKO15516 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLOCKO15516 INE2-201ENST00000630399 1874 ntBASIC14.16□□□□□ -0.14
CLOCKO15516 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLOCKO15516 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.16□□□□□ -0.14
CLOCKO15516 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLOCKO15516 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.16□□□□□ -0.14
CLOCKO15516 AL731571.1-201ENST00000617058 5428 ntBASIC14.16□□□□□ -0.14
CLOCKO15516 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.16□□□□□ -0.14
CLOCKO15516 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 AC015818.8-201ENST00000587907 1519 ntBASIC14.15□□□□□ -0.14
CLOCKO15516 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLOCKO15516 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.15□□□□□ -0.14
CLOCKO15516 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.15□□□□□ -0.14
CLOCKO15516 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.15□□□□□ -0.14
CLOCKO15516 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 KRT8P12-202ENST00000472924 1397 ntBASIC14.15□□□□□ -0.14
CLOCKO15516 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.15□□□□□ -0.14
CLOCKO15516 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.15□□□□□ -0.14
CLOCKO15516 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.15□□□□□ -0.14
CLOCKO15516 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.15□□□□□ -0.14
CLOCKO15516 TMEM198B-204ENST00000484016 896 ntBASIC14.15□□□□□ -0.14
CLOCKO15516 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLOCKO15516 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.15□□□□□ -0.14
CLOCKO15516 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.15□□□□□ -0.14
CLOCKO15516 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.15□□□□□ -0.14
CLOCKO15516 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.15□□□□□ -0.14
CLOCKO15516 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.15□□□□□ -0.14
CLOCKO15516 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.15□□□□□ -0.14
CLOCKO15516 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLOCKO15516 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.15□□□□□ -0.14
CLOCKO15516 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.15□□□□□ -0.14
CLOCKO15516 AL589739.1-201ENST00000607720 493 ntBASIC14.15□□□□□ -0.14
CLOCKO15516 AC008761.3-201ENST00000624803 892 ntBASIC14.15□□□□□ -0.14
CLOCKO15516 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CLOCKO15516 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CLOCKO15516 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.15□□□□□ -0.14
CLOCKO15516 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.15□□□□□ -0.14
CLOCKO15516 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.15□□□□□ -0.14
CLOCKO15516 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLOCKO15516 AC090505.1-201ENST00000430515 1834 ntBASIC14.15□□□□□ -0.14
CLOCKO15516 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CLOCKO15516 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.15□□□□□ -0.14
CLOCKO15516 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 NUTM2HP-201ENST00000442076 2498 ntBASIC14.15□□□□□ -0.14
CLOCKO15516 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLOCKO15516 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.15□□□□□ -0.14
CLOCKO15516 CETN4P-206ENST00000642099 2168 ntBASIC14.15□□□□□ -0.15
CLOCKO15516 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.14□□□□□ -0.15
CLOCKO15516 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CLOCKO15516 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CLOCKO15516 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms