Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.43■□□□□ 0.06
SOX1O00570 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SOX1O00570 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.43■□□□□ 0.06
SOX1O00570 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.43■□□□□ 0.06
SOX1O00570 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.43■□□□□ 0.06
SOX1O00570 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.43■□□□□ 0.06
SOX1O00570 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SOX1O00570 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX1O00570 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX1O00570 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX1O00570 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX1O00570 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX1O00570 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SOX1O00570 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SOX1O00570 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SOX1O00570 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.42■□□□□ 0.06
SOX1O00570 AC007952.5-201ENST00000572818 1486 ntBASIC15.42■□□□□ 0.06
SOX1O00570 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX1O00570 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC15.42■□□□□ 0.06
SOX1O00570 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC15.42■□□□□ 0.06
SOX1O00570 HNRNPA1P21-201ENST00000424115 961 ntBASIC15.42■□□□□ 0.06
SOX1O00570 AP000244.1-201ENST00000424582 201 ntBASIC15.42■□□□□ 0.06
SOX1O00570 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC15.42■□□□□ 0.06
SOX1O00570 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC15.42■□□□□ 0.06
SOX1O00570 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC15.42■□□□□ 0.06
SOX1O00570 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC15.42■□□□□ 0.06
SOX1O00570 AC004923.3-201ENST00000527532 355 ntBASIC15.42■□□□□ 0.06
SOX1O00570 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX1O00570 TPST2P1-201ENST00000564073 1102 ntBASIC15.42■□□□□ 0.06
SOX1O00570 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX1O00570 RN7SL300P-201ENST00000582522 318 ntBASIC15.42■□□□□ 0.06
SOX1O00570 CLPP-205ENST00000596605 646 ntTSL 2 BASIC15.42■□□□□ 0.06
SOX1O00570 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC15.42■□□□□ 0.06
SOX1O00570 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX1O00570 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC15.42■□□□□ 0.06
SOX1O00570 BX322534.1-201ENST00000635574 241 ntBASIC15.42■□□□□ 0.06
SOX1O00570 AC215524.1-201ENST00000635696 241 ntBASIC15.42■□□□□ 0.06
SOX1O00570 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SOX1O00570 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SOX1O00570 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SOX1O00570 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SOX1O00570 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX1O00570 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SOX1O00570 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC15.42■□□□□ 0.06
SOX1O00570 AC138761.6-201ENST00000583997 1423 ntBASIC15.42■□□□□ 0.06
SOX1O00570 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.42■□□□□ 0.06
SOX1O00570 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX1O00570 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SOX1O00570 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX1O00570 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX1O00570 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.42■□□□□ 0.06
SOX1O00570 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SOX1O00570 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
SOX1O00570 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SOX1O00570 NKILA-202ENST00000614771 2598 ntBASIC15.41■□□□□ 0.06
SOX1O00570 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SOX1O00570 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SOX1O00570 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SOX1O00570 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
SOX1O00570 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.41■□□□□ 0.06
SOX1O00570 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.41■□□□□ 0.06
SOX1O00570 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.41■□□□□ 0.06
SOX1O00570 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC15.41■□□□□ 0.06
SOX1O00570 TLE1P1-201ENST00000422965 589 ntBASIC15.41■□□□□ 0.06
SOX1O00570 FDPSP7-201ENST00000429043 1054 ntBASIC15.41■□□□□ 0.06
SOX1O00570 CDKN2A-AS1-201ENST00000441769 823 ntBASIC15.41■□□□□ 0.06
SOX1O00570 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC15.41■□□□□ 0.06
SOX1O00570 RN7SL767P-201ENST00000493013 295 ntBASIC15.41■□□□□ 0.06
SOX1O00570 AC022447.5-201ENST00000504817 392 ntBASIC15.41■□□□□ 0.06
SOX1O00570 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SOX1O00570 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC15.41■□□□□ 0.06
SOX1O00570 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.41■□□□□ 0.06
SOX1O00570 RN7SL478P-201ENST00000584358 298 ntBASIC15.41■□□□□ 0.06
SOX1O00570 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC15.41■□□□□ 0.06
SOX1O00570 IFNL3P1-201ENST00000595082 501 ntBASIC15.41■□□□□ 0.06
SOX1O00570 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC15.41■□□□□ 0.06
SOX1O00570 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC15.41■□□□□ 0.06
SOX1O00570 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC15.41■□□□□ 0.06
SOX1O00570 URAHP-205ENST00000610227 398 ntBASIC15.41■□□□□ 0.06
SOX1O00570 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.41■□□□□ 0.06
SOX1O00570 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SOX1O00570 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SOX1O00570 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SOX1O00570 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC15.41■□□□□ 0.06
SOX1O00570 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SOX1O00570 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SOX1O00570 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.41■□□□□ 0.06
SOX1O00570 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SOX1O00570 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.41■□□□□ 0.06
SOX1O00570 SALL4P5-201ENST00000419001 1760 ntBASIC15.41■□□□□ 0.06
SOX1O00570 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.41■□□□□ 0.06
SOX1O00570 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.41■□□□□ 0.06
SOX1O00570 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.41■□□□□ 0.06
SOX1O00570 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.41■□□□□ 0.06
SOX1O00570 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SOX1O00570 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SOX1O00570 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SOX1O00570 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms