Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LOC102724428A0A0B4J2F2 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LOC102724428A0A0B4J2F2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.45■□□□□ 0.54
LOC102724428A0A0B4J2F2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LOC102724428A0A0B4J2F2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LOC102724428A0A0B4J2F2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.45■□□□□ 0.54
LOC102724428A0A0B4J2F2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LOC102724428A0A0B4J2F2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 RNVU1-8-201ENST00000364272 125 ntBASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 BAX-205ENST00000391871 687 ntTSL 5 BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 RN7SL564P-201ENST00000496309 250 ntBASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 SKA2-205ENST00000580541 689 ntTSL 3 BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 AP001527.2-201ENST00000614441 631 ntBASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 LAP3P2-201ENST00000454686 1454 ntBASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 AC067931.2-201ENST00000623655 2003 ntBASIC18.44■□□□□ 0.54
LOC102724428A0A0B4J2F2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 ACTG1P19-201ENST00000418987 1116 ntBASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 DDX39AP1-201ENST00000445147 1181 ntBASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 FAM86KP-201ENST00000509817 987 ntBASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 NAA40-205ENST00000539656 577 ntTSL 4 BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 AP003392.6-201ENST00000607709 325 ntBASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 ST5-261ENST00000626808 1071 ntTSL 5 BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC102724428A0A0B4J2F2 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 LINC00554-201ENST00000564841 3011 ntBASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms