Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 DUX4L47-201ENST00000566374 394 ntBASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 MIR3687-2-201ENST00000577708 61 ntBASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 MIR3687-1-201ENST00000614492 61 ntBASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 CLK3P2-201ENST00000427566 1453 ntBASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 GALC-206ENST00000544807 2528 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 SALL4P5-201ENST00000419001 1760 ntBASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 DMBT1P1-203ENST00000636837 4628 ntBASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 AL139400.1-201ENST00000366220 510 ntBASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 AL391069.4-201ENST00000609583 481 ntBASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 AL136172.1-201ENST00000598590 1394 ntBASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 AC073548.1-201ENST00000624088 1882 ntBASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 AC131212.3-201ENST00000624087 4219 ntBASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms