Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 MIR3197-201ENST00000582241 73 ntBASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 AC145423.3-201ENST00000615987 467 ntBASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 AC069503.1-202ENST00000616576 642 ntBASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.85□□□□□ -0.03
VPS9D1Q9Y2B5 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 AC023908.3-201ENST00000564211 3047 ntBASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 MESTP3-201ENST00000503460 968 ntBASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 AC131206.1-201ENST00000538078 1211 ntBASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 BNIP3P35-201ENST00000604530 490 ntBASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 AC132938.4-201ENST00000623835 848 ntBASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 MRPL37P1-201ENST00000592451 1337 ntBASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 AL136172.1-201ENST00000598590 1394 ntBASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS9D1Q9Y2B5 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.83□□□□□ -0.03
VPS9D1Q9Y2B5 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
VPS9D1Q9Y2B5 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
VPS9D1Q9Y2B5 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS9D1Q9Y2B5 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS9D1Q9Y2B5 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
VPS9D1Q9Y2B5 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
VPS9D1Q9Y2B5 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
VPS9D1Q9Y2B5 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.83□□□□□ -0.03
VPS9D1Q9Y2B5 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS9D1Q9Y2B5 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
VPS9D1Q9Y2B5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS9D1Q9Y2B5 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS9D1Q9Y2B5 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS9D1Q9Y2B5 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 AC005229.1-201ENST00000392885 409 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms