Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.8□□□□□ -0.04
SPASTQ9UBP0 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 AC007663.3-201ENST00000609632 465 ntBASIC14.8□□□□□ -0.04
SPASTQ9UBP0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 LINC01101-201ENST00000622953 1884 ntBASIC14.8□□□□□ -0.04
SPASTQ9UBP0 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPASTQ9UBP0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 AC007686.3-201ENST00000619017 3487 ntBASIC14.78□□□□□ -0.04
SPASTQ9UBP0 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms