Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 CHCHD2P3-201ENST00000603038 451 ntBASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 AC025048.6-201ENST00000634326 1161 ntBASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 APP-205ENST00000358918 2366 ntTSL 5 BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
LINC00474Q9P2X8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 CICP11-201ENST00000434745 2827 ntBASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 KRT8P14-201ENST00000414254 1442 ntBASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 AL158070.2-201ENST00000623713 1621 ntBASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 AL139094.1-201ENST00000405549 1188 ntBASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 ACTG1P3-201ENST00000431775 1114 ntBASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 RN7SL692P-201ENST00000464677 288 ntBASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 HNRNPA1P13-201ENST00000510646 963 ntBASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 CR383656.12-201ENST00000549567 513 ntBASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 KSR1-207ENST00000578981 748 ntTSL 4 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 AL360270.3-201ENST00000609118 1348 ntBASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms