Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNIH4Q9P003 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNIH4Q9P003 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNIH4Q9P003 AC006001.1-201ENST00000325130 474 ntBASIC13.91□□□□□ -0.18
CNIH4Q9P003 ANKRD19P-201ENST00000338192 862 ntBASIC13.91□□□□□ -0.18
CNIH4Q9P003 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.91□□□□□ -0.18
CNIH4Q9P003 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CNIH4Q9P003 HLA-K-203ENST00000430151 1046 ntBASIC13.91□□□□□ -0.18
CNIH4Q9P003 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.91□□□□□ -0.18
CNIH4Q9P003 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.91□□□□□ -0.18
CNIH4Q9P003 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.91□□□□□ -0.18
CNIH4Q9P003 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CNIH4Q9P003 AC119751.2-201ENST00000504529 210 ntBASIC13.91□□□□□ -0.18
CNIH4Q9P003 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNIH4Q9P003 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CNIH4Q9P003 AC023310.1-201ENST00000554836 735 ntBASIC13.91□□□□□ -0.18
CNIH4Q9P003 DUX4L47-201ENST00000566374 394 ntBASIC13.91□□□□□ -0.18
CNIH4Q9P003 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.91□□□□□ -0.18
CNIH4Q9P003 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.91□□□□□ -0.18
CNIH4Q9P003 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.91□□□□□ -0.18
CNIH4Q9P003 ENPP7P14-201ENST00000621765 1040 ntBASIC13.91□□□□□ -0.18
CNIH4Q9P003 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.91□□□□□ -0.18
CNIH4Q9P003 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CNIH4Q9P003 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.91□□□□□ -0.18
CNIH4Q9P003 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.91□□□□□ -0.18
CNIH4Q9P003 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CNIH4Q9P003 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.91□□□□□ -0.18
CNIH4Q9P003 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNIH4Q9P003 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNIH4Q9P003 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNIH4Q9P003 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CNIH4Q9P003 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNIH4Q9P003 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CNIH4Q9P003 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.91□□□□□ -0.18
CNIH4Q9P003 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNIH4Q9P003 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNIH4Q9P003 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNIH4Q9P003 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.91□□□□□ -0.18
CNIH4Q9P003 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNIH4Q9P003 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNIH4Q9P003 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNIH4Q9P003 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 EIF3FP3-201ENST00000434851 1086 ntBASIC13.9□□□□□ -0.18
CNIH4Q9P003 RPS2P32-201ENST00000439199 892 ntBASIC13.9□□□□□ -0.18
CNIH4Q9P003 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 AC245100.3-201ENST00000441281 285 ntBASIC13.9□□□□□ -0.18
CNIH4Q9P003 CSF2RBP1-201ENST00000447905 391 ntBASIC13.9□□□□□ -0.18
CNIH4Q9P003 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNIH4Q9P003 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNIH4Q9P003 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 AC138951.2-201ENST00000623455 1161 ntBASIC13.9□□□□□ -0.18
CNIH4Q9P003 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNIH4Q9P003 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNIH4Q9P003 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNIH4Q9P003 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNIH4Q9P003 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNIH4Q9P003 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNIH4Q9P003 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNIH4Q9P003 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNIH4Q9P003 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNIH4Q9P003 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNIH4Q9P003 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.9□□□□□ -0.18
CNIH4Q9P003 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNIH4Q9P003 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNIH4Q9P003 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
CNIH4Q9P003 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNIH4Q9P003 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CNIH4Q9P003 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CNIH4Q9P003 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNIH4Q9P003 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNIH4Q9P003 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNIH4Q9P003 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNIH4Q9P003 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNIH4Q9P003 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.89□□□□□ -0.19
CNIH4Q9P003 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.89□□□□□ -0.19
CNIH4Q9P003 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNIH4Q9P003 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNIH4Q9P003 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms