Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 KRT223P-202ENST00000449164 1292 ntBASIC12.72□□□□□ -0.37
GCM1Q9NP62 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 AC119751.2-201ENST00000504529 210 ntBASIC12.72□□□□□ -0.37
GCM1Q9NP62 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 AL359881.2-201ENST00000602973 570 ntBASIC12.72□□□□□ -0.37
GCM1Q9NP62 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.72□□□□□ -0.37
GCM1Q9NP62 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 AJ011931.1-201ENST00000618749 2492 ntBASIC12.72□□□□□ -0.37
GCM1Q9NP62 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 AL354989.2-201ENST00000435838 1540 ntBASIC12.72□□□□□ -0.37
GCM1Q9NP62 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 AHCYP2-201ENST00000430630 1300 ntBASIC12.71□□□□□ -0.37
GCM1Q9NP62 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 AC026954.1-201ENST00000429771 1293 ntBASIC12.71□□□□□ -0.37
GCM1Q9NP62 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 MESTP3-201ENST00000503460 968 ntBASIC12.71□□□□□ -0.37
GCM1Q9NP62 FTLP10-202ENST00000505798 471 ntBASIC12.71□□□□□ -0.37
GCM1Q9NP62 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GCM1Q9NP62 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 MIR4259-201ENST00000584466 101 ntBASIC12.71□□□□□ -0.37
GCM1Q9NP62 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 AC138466.3-201ENST00000619983 221 ntBASIC12.71□□□□□ -0.37
GCM1Q9NP62 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
GCM1Q9NP62 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.71□□□□□ -0.38
GCM1Q9NP62 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GCM1Q9NP62 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
GCM1Q9NP62 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
GCM1Q9NP62 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
GCM1Q9NP62 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GCM1Q9NP62 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GCM1Q9NP62 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
GCM1Q9NP62 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.71□□□□□ -0.38
GCM1Q9NP62 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
GCM1Q9NP62 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
GCM1Q9NP62 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GCM1Q9NP62 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
GCM1Q9NP62 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GCM1Q9NP62 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms