Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC138466.3-201ENST00000619983 221 ntBASIC13.02□□□□□ -0.33
CDH20Q9HBT6 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 SALL4P5-201ENST00000419001 1760 ntBASIC13.02□□□□□ -0.33
CDH20Q9HBT6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 CICP24-201ENST00000605464 2705 ntBASIC13.01□□□□□ -0.33
CDH20Q9HBT6 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 INTS4P1-203ENST00000641008 3683 ntBASIC13.01□□□□□ -0.33
CDH20Q9HBT6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 OR8S1-201ENST00000310194 1080 ntBASIC13.01□□□□□ -0.33
CDH20Q9HBT6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 AC079776.1-201ENST00000401540 1152 ntBASIC13.01□□□□□ -0.33
CDH20Q9HBT6 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 CNN2P8-201ENST00000421872 913 ntBASIC13.01□□□□□ -0.33
CDH20Q9HBT6 TLE1P1-201ENST00000422965 589 ntBASIC13.01□□□□□ -0.33
CDH20Q9HBT6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 MESTP3-201ENST00000503460 968 ntBASIC13.01□□□□□ -0.33
CDH20Q9HBT6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 CLUHP2-201ENST00000426660 1303 ntBASIC13.01□□□□□ -0.33
CDH20Q9HBT6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 FKBP4P6-201ENST00000457486 1332 ntBASIC13.01□□□□□ -0.33
CDH20Q9HBT6 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.01□□□□□ -0.33
CDH20Q9HBT6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CDH20Q9HBT6 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CDH20Q9HBT6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13□□□□□ -0.33
CDH20Q9HBT6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13□□□□□ -0.33
CDH20Q9HBT6 AC013726.1-201ENST00000563747 2285 ntBASIC13□□□□□ -0.33
CDH20Q9HBT6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13□□□□□ -0.33
CDH20Q9HBT6 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13□□□□□ -0.33
CDH20Q9HBT6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13□□□□□ -0.33
CDH20Q9HBT6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13□□□□□ -0.33
CDH20Q9HBT6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 GK-202ENST00000378941 458 ntTSL 3 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms