Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 TSPY16P-201ENST00000449843 468 ntBASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 AC007967.4-201ENST00000614700 386 ntBASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 AL118506.1-201ENST00000601296 3082 ntBASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 BEND3P3-201ENST00000611030 2440 ntBASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 AC241585.1-201ENST00000433527 519 ntBASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 AC138761.1-201ENST00000584393 385 ntBASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
KLHL4Q9C0H6 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 TCAM1P-207ENST00000485295 1537 ntBASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms