Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 LINC00528-201ENST00000600723 2160 ntBASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 PPT1-215ENST00000641471 2368 ntBASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH11YQ9BZA8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 AL109954.1-202ENST00000564051 2148 ntBASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 STK16-203ENST00000409516 895 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 CSNK1G2P1-201ENST00000442675 955 ntBASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 RGS5-216ENST00000449680 788 ntTSL 3 BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 AL022344.2-201ENST00000568976 968 ntBASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 AL133467.4-201ENST00000602953 725 ntBASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 AC002044.2-201ENST00000624910 970 ntBASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PCDH11YQ9BZA8 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PCDH11YQ9BZA8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH11YQ9BZA8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH11YQ9BZA8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH11YQ9BZA8 AC007950.2-201ENST00000615045 2347 ntBASIC18.83■□□□□ 0.6
PCDH11YQ9BZA8 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
PCDH11YQ9BZA8 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDH11YQ9BZA8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH11YQ9BZA8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDH11YQ9BZA8 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 GCSHP3-201ENST00000431120 391 ntBASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 AL139008.1-201ENST00000437894 228 ntBASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 RPL35P9-201ENST00000446059 350 ntBASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 NSD1-211ENST00000511258 809 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 SKA2-205ENST00000580541 689 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH11YQ9BZA8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 BAX-205ENST00000391871 687 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms