Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
GABARAPL3Q9BY60 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.47□□□□□ -0.25
GABARAPL3Q9BY60 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
GABARAPL3Q9BY60 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.47□□□□□ -0.25
GABARAPL3Q9BY60 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 AC135782.3-201ENST00000562782 2105 ntBASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 DNAJB3-201ENST00000446806 729 ntBASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 FAM86LP-201ENST00000478302 853 ntBASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 AL662799.1-202ENST00000614205 422 ntBASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 AP001002.3-201ENST00000623482 206 ntBASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 BEND3P3-201ENST00000611030 2440 ntBASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GABARAPL3Q9BY60 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GABARAPL3Q9BY60 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
GABARAPL3Q9BY60 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
GABARAPL3Q9BY60 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.46□□□□□ -0.26
GABARAPL3Q9BY60 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
GABARAPL3Q9BY60 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GABARAPL3Q9BY60 AC139712.1-201ENST00000378256 1875 ntBASIC13.46□□□□□ -0.26
GABARAPL3Q9BY60 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.46□□□□□ -0.26
GABARAPL3Q9BY60 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
GABARAPL3Q9BY60 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.46□□□□□ -0.26
GABARAPL3Q9BY60 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GABARAPL3Q9BY60 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GABARAPL3Q9BY60 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GABARAPL3Q9BY60 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.46□□□□□ -0.26
GABARAPL3Q9BY60 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 AC087386.2-201ENST00000623212 4637 ntBASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 AL138725.1-201ENST00000407347 1314 ntBASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.45□□□□□ -0.26
GABARAPL3Q9BY60 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms