Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 DOC2GP-202ENST00000514950 1163 ntBASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 AP001582.1-201ENST00000525856 295 ntBASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 AC093813.1-201ENST00000605066 256 ntBASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 AL136172.1-201ENST00000598590 1394 ntBASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 AC020910.6-201ENST00000623084 1459 ntBASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 INTS4P2-202ENST00000614726 2019 ntBASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 AC011498.7-201ENST00000624986 2027 ntBASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 SPDYE19P-201ENST00000338590 713 ntBASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 NUS1P3-201ENST00000423502 862 ntBASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 GNAQP1-201ENST00000444815 1067 ntBASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 MYADML-201ENST00000474610 2147 ntBASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 AC120045.2-201ENST00000567334 178 ntBASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 AP001160.2-201ENST00000596071 487 ntBASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 AC007431.3-201ENST00000623221 587 ntBASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms