Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 AC140878.1-201ENST00000565277 250 ntBASIC12.77□□□□□ -0.37
NICN1Q9BSH3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 KRT8P22-201ENST00000562317 1415 ntBASIC12.77□□□□□ -0.37
NICN1Q9BSH3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 AC130686.1-201ENST00000622936 2466 ntBASIC12.77□□□□□ -0.37
NICN1Q9BSH3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NICN1Q9BSH3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 TREML5P-201ENST00000421694 576 ntBASIC12.76□□□□□ -0.37
NICN1Q9BSH3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 AC097493.3-201ENST00000509725 367 ntBASIC12.76□□□□□ -0.37
NICN1Q9BSH3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NICN1Q9BSH3 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NICN1Q9BSH3 KRT18P13-201ENST00000400056 1290 ntBASIC12.75□□□□□ -0.37
NICN1Q9BSH3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms