Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
PKP4Q99569 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.43□□□□□ -0.1
PKP4Q99569 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.43□□□□□ -0.1
PKP4Q99569 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.43□□□□□ -0.1
PKP4Q99569 AC022210.1-201ENST00000449856 793 ntBASIC14.43□□□□□ -0.1
PKP4Q99569 TPT1P11-201ENST00000458482 498 ntBASIC14.43□□□□□ -0.1
PKP4Q99569 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.43□□□□□ -0.1
PKP4Q99569 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.43□□□□□ -0.1
PKP4Q99569 AC079316.1-201ENST00000548397 411 ntBASIC14.43□□□□□ -0.1
PKP4Q99569 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.43□□□□□ -0.1
PKP4Q99569 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.43□□□□□ -0.1
PKP4Q99569 AC008687.7-202ENST00000637404 953 ntBASIC14.43□□□□□ -0.1
PKP4Q99569 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.43□□□□□ -0.1
PKP4Q99569 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.43□□□□□ -0.1
PKP4Q99569 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.43□□□□□ -0.1
PKP4Q99569 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.43□□□□□ -0.1
PKP4Q99569 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 KRT8P4-201ENST00000509735 1454 ntBASIC14.43□□□□□ -0.1
PKP4Q99569 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
PKP4Q99569 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.43□□□□□ -0.1
PKP4Q99569 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PKP4Q99569 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PKP4Q99569 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.42□□□□□ -0.1
PKP4Q99569 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
PKP4Q99569 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PKP4Q99569 AC005089.1-201ENST00000619486 2241 ntBASIC14.42□□□□□ -0.1
PKP4Q99569 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.42□□□□□ -0.1
PKP4Q99569 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.42□□□□□ -0.1
PKP4Q99569 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PKP4Q99569 AC015688.4-201ENST00000580780 1647 ntBASIC14.42□□□□□ -0.1
PKP4Q99569 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.42□□□□□ -0.1
PKP4Q99569 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.42□□□□□ -0.1
PKP4Q99569 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
PKP4Q99569 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.42□□□□□ -0.1
PKP4Q99569 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.42□□□□□ -0.1
PKP4Q99569 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.42□□□□□ -0.1
PKP4Q99569 ALG3P1-201ENST00000508806 1114 ntBASIC14.42□□□□□ -0.1
PKP4Q99569 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.42□□□□□ -0.1
PKP4Q99569 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.42□□□□□ -0.1
PKP4Q99569 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.42□□□□□ -0.1
PKP4Q99569 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.42□□□□□ -0.1
PKP4Q99569 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
PKP4Q99569 PPY2P-201ENST00000582808 702 ntBASIC14.42□□□□□ -0.1
PKP4Q99569 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.42□□□□□ -0.1
PKP4Q99569 AC239800.4-201ENST00000603712 296 ntBASIC14.42□□□□□ -0.1
PKP4Q99569 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.42□□□□□ -0.1
PKP4Q99569 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PKP4Q99569 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.42□□□□□ -0.1
PKP4Q99569 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.42□□□□□ -0.1
PKP4Q99569 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PKP4Q99569 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.42□□□□□ -0.1
PKP4Q99569 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.42□□□□□ -0.1
PKP4Q99569 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.42□□□□□ -0.1
PKP4Q99569 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PKP4Q99569 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.42□□□□□ -0.1
PKP4Q99569 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PKP4Q99569 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.41□□□□□ -0.1
PKP4Q99569 AC015802.1-201ENST00000588104 1449 ntBASIC14.41□□□□□ -0.1
PKP4Q99569 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PKP4Q99569 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms