Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 AC004870.1-201ENST00000315132 882 ntBASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 FAM220BP-201ENST00000377689 816 ntBASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 MIR4751-201ENST00000578027 74 ntBASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 AL121912.1-201ENST00000603683 238 ntBASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IPQ96QF0 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 OR2I1P-208ENST00000641137 4948 ntBASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 AL133267.1-201ENST00000398220 340 ntBASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 FAAHP1-202ENST00000446499 1238 ntBASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 AL138918.1-201ENST00000568306 659 ntBASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 AC073869.1-201ENST00000415574 2762 ntBASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB3IPQ96QF0 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 AP3S2-216ENST00000617003 1561 ntBASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 PTPRVP-205ENST00000641549 5067 ntBASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAB3IPQ96QF0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms