Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC15.58■□□□□ 0.09
ALPK3Q96L96 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
ALPK3Q96L96 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC15.58■□□□□ 0.09
ALPK3Q96L96 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC15.58■□□□□ 0.09
ALPK3Q96L96 AC093700.1-201ENST00000503348 717 ntBASIC15.58■□□□□ 0.09
ALPK3Q96L96 PRSS3P1-201ENST00000503996 742 ntBASIC15.58■□□□□ 0.09
ALPK3Q96L96 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.58■□□□□ 0.09
ALPK3Q96L96 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.58■□□□□ 0.09
ALPK3Q96L96 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC15.58■□□□□ 0.09
ALPK3Q96L96 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
ALPK3Q96L96 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.58■□□□□ 0.09
ALPK3Q96L96 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.58■□□□□ 0.09
ALPK3Q96L96 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ALPK3Q96L96 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ALPK3Q96L96 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
ALPK3Q96L96 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.58■□□□□ 0.09
ALPK3Q96L96 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.58■□□□□ 0.09
ALPK3Q96L96 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.58■□□□□ 0.09
ALPK3Q96L96 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ALPK3Q96L96 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
ALPK3Q96L96 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
ALPK3Q96L96 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ALPK3Q96L96 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ALPK3Q96L96 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC15.58■□□□□ 0.08
ALPK3Q96L96 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
ALPK3Q96L96 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ALPK3Q96L96 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ALPK3Q96L96 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
ALPK3Q96L96 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ALPK3Q96L96 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ALPK3Q96L96 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
ALPK3Q96L96 NALT1-202ENST00000450304 437 ntTSL 3 BASIC15.58■□□□□ 0.08
ALPK3Q96L96 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ALPK3Q96L96 GOLGA2P8-201ENST00000505201 779 ntBASIC15.58■□□□□ 0.08
ALPK3Q96L96 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC15.58■□□□□ 0.08
ALPK3Q96L96 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ALPK3Q96L96 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC15.58■□□□□ 0.08
ALPK3Q96L96 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.58■□□□□ 0.08
ALPK3Q96L96 RN7SL440P-201ENST00000577855 343 ntBASIC15.58■□□□□ 0.08
ALPK3Q96L96 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC15.58■□□□□ 0.08
ALPK3Q96L96 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC15.58■□□□□ 0.08
ALPK3Q96L96 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC15.58■□□□□ 0.08
ALPK3Q96L96 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ALPK3Q96L96 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ALPK3Q96L96 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
ALPK3Q96L96 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.58■□□□□ 0.08
ALPK3Q96L96 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ALPK3Q96L96 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.58■□□□□ 0.08
ALPK3Q96L96 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
ALPK3Q96L96 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ALPK3Q96L96 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
ALPK3Q96L96 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ALPK3Q96L96 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 AC023024.2-201ENST00000623561 1993 ntBASIC15.57■□□□□ 0.08
ALPK3Q96L96 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 AC004923.3-201ENST00000527532 355 ntBASIC15.57■□□□□ 0.08
ALPK3Q96L96 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 HNRNPA1P5-201ENST00000558213 966 ntBASIC15.57■□□□□ 0.08
ALPK3Q96L96 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 AC106782.5-201ENST00000616011 337 ntBASIC15.57■□□□□ 0.08
ALPK3Q96L96 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 AC011270.2-201ENST00000624293 2550 ntBASIC15.57■□□□□ 0.08
ALPK3Q96L96 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 MROH4P-201ENST00000431302 1578 ntBASIC15.57■□□□□ 0.08
ALPK3Q96L96 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 KRT8P18-201ENST00000413425 1445 ntBASIC15.57■□□□□ 0.08
ALPK3Q96L96 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.57■□□□□ 0.08
ALPK3Q96L96 LAP3P2-201ENST00000454686 1454 ntBASIC15.57■□□□□ 0.08
ALPK3Q96L96 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms