Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 BEND3P1-201ENST00000421591 1944 ntBASIC15.66■□□□□ 0.1
TRIM11Q96F44 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 AC020910.6-201ENST00000623084 1459 ntBASIC15.66■□□□□ 0.1
TRIM11Q96F44 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 RPSAP52-203ENST00000622976 1023 ntBASIC15.66■□□□□ 0.1
TRIM11Q96F44 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM11Q96F44 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM11Q96F44 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 KHSRPP1-201ENST00000427983 1768 ntBASIC15.65■□□□□ 0.1
TRIM11Q96F44 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 AC005229.1-201ENST00000392885 409 ntBASIC15.65■□□□□ 0.1
TRIM11Q96F44 RN7SKP175-201ENST00000408472 289 ntBASIC15.65■□□□□ 0.1
TRIM11Q96F44 PUDPP3-201ENST00000445368 636 ntBASIC15.65■□□□□ 0.1
TRIM11Q96F44 AC007389.4-201ENST00000454674 793 ntBASIC15.65■□□□□ 0.1
TRIM11Q96F44 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 AC015936.2-201ENST00000593177 259 ntBASIC15.65■□□□□ 0.1
TRIM11Q96F44 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms