Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 AC243960.2-201ENST00000600996 747 ntBASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 GPR182-203ENST00000622922 591 ntBASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 AC055811.4-201ENST00000624039 1754 ntBASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLIP3Q96DZ5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 BTBD6P1-201ENST00000412176 1267 ntBASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 EIF3FP3-201ENST00000434851 1086 ntBASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 AC245100.3-201ENST00000441281 285 ntBASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 HOMER2P2-201ENST00000451621 847 ntBASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 REXO1L2P-201ENST00000425429 2069 ntBASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 PPT1-215ENST00000641471 2368 ntBASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 TMBIM7P-203ENST00000641617 1718 ntBASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.41□□□□□ -0.1
CLIP3Q96DZ5 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 REXO1L5P-201ENST00000622260 2098 ntBASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms