Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APH1AQ96BI3 AC092135.3-201ENST00000624151 1846 ntBASIC13.15□□□□□ -0.3
APH1AQ96BI3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1AQ96BI3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APH1AQ96BI3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.15□□□□□ -0.3
APH1AQ96BI3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.15□□□□□ -0.3
APH1AQ96BI3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
APH1AQ96BI3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1AQ96BI3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APH1AQ96BI3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1AQ96BI3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APH1AQ96BI3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1AQ96BI3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
APH1AQ96BI3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1AQ96BI3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
APH1AQ96BI3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
APH1AQ96BI3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
APH1AQ96BI3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 MRPL37P1-201ENST00000592451 1337 ntBASIC13.14□□□□□ -0.31
APH1AQ96BI3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 TNRC18P2-201ENST00000417666 2714 ntBASIC13.14□□□□□ -0.31
APH1AQ96BI3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 AC007292.2-201ENST00000593524 1812 ntBASIC13.14□□□□□ -0.31
APH1AQ96BI3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 FAM86HP-204ENST00000513466 959 ntBASIC13.14□□□□□ -0.31
APH1AQ96BI3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 RN7SL219P-201ENST00000582872 296 ntBASIC13.14□□□□□ -0.31
APH1AQ96BI3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 AC008825.2-201ENST00000603374 718 ntBASIC13.14□□□□□ -0.31
APH1AQ96BI3 AL358472.3-201ENST00000608147 415 ntBASIC13.14□□□□□ -0.31
APH1AQ96BI3 AP001002.3-201ENST00000623482 206 ntBASIC13.14□□□□□ -0.31
APH1AQ96BI3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1AQ96BI3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
APH1AQ96BI3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.13□□□□□ -0.31
APH1AQ96BI3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1AQ96BI3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1AQ96BI3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1AQ96BI3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.13□□□□□ -0.31
APH1AQ96BI3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1AQ96BI3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.13□□□□□ -0.31
APH1AQ96BI3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
APH1AQ96BI3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
APH1AQ96BI3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1AQ96BI3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
APH1AQ96BI3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1AQ96BI3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.13□□□□□ -0.31
APH1AQ96BI3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APH1AQ96BI3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APH1AQ96BI3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.13□□□□□ -0.31
APH1AQ96BI3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1AQ96BI3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1AQ96BI3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
APH1AQ96BI3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1AQ96BI3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.13□□□□□ -0.31
APH1AQ96BI3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.13□□□□□ -0.31
APH1AQ96BI3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APH1AQ96BI3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.13□□□□□ -0.31
APH1AQ96BI3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.13□□□□□ -0.31
APH1AQ96BI3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.13□□□□□ -0.31
APH1AQ96BI3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
APH1AQ96BI3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms