Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC015922.1-201ENST00000421102 1152 ntBASIC13.74□□□□□ -0.21
HPS1Q92902 AC092580.3-201ENST00000430932 139 ntBASIC13.74□□□□□ -0.21
HPS1Q92902 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.74□□□□□ -0.21
HPS1Q92902 ZNF736P11Y-201ENST00000442535 1213 ntBASIC13.74□□□□□ -0.21
HPS1Q92902 ZNF736P12Y-201ENST00000443152 1243 ntBASIC13.74□□□□□ -0.21
HPS1Q92902 ZNF736P4Y-201ENST00000454995 1243 ntBASIC13.74□□□□□ -0.21
HPS1Q92902 HLA-V-204ENST00000476601 1289 ntBASIC13.74□□□□□ -0.21
HPS1Q92902 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.74□□□□□ -0.21
HPS1Q92902 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC13.74□□□□□ -0.21
HPS1Q92902 AC027369.6-201ENST00000525520 931 ntBASIC13.74□□□□□ -0.21
HPS1Q92902 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.74□□□□□ -0.21
HPS1Q92902 AC003101.2-201ENST00000612557 442 ntBASIC13.74□□□□□ -0.21
HPS1Q92902 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.74□□□□□ -0.21
HPS1Q92902 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
HPS1Q92902 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.74□□□□□ -0.21
HPS1Q92902 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HPS1Q92902 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HPS1Q92902 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HPS1Q92902 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.74□□□□□ -0.21
HPS1Q92902 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HPS1Q92902 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.74□□□□□ -0.21
HPS1Q92902 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HPS1Q92902 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.73□□□□□ -0.21
HPS1Q92902 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HPS1Q92902 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.73□□□□□ -0.21
HPS1Q92902 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HPS1Q92902 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HPS1Q92902 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HPS1Q92902 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.73□□□□□ -0.21
HPS1Q92902 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.73□□□□□ -0.21
HPS1Q92902 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.73□□□□□ -0.21
HPS1Q92902 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HPS1Q92902 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.73□□□□□ -0.21
HPS1Q92902 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.73□□□□□ -0.21
HPS1Q92902 AC244107.1-201ENST00000442033 332 ntBASIC13.73□□□□□ -0.21
HPS1Q92902 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.73□□□□□ -0.21
HPS1Q92902 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.73□□□□□ -0.21
HPS1Q92902 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.73□□□□□ -0.21
HPS1Q92902 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.73□□□□□ -0.21
HPS1Q92902 TMF1P1-201ENST00000576058 373 ntBASIC13.73□□□□□ -0.21
HPS1Q92902 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
HPS1Q92902 MIR4321-201ENST00000592276 80 ntBASIC13.73□□□□□ -0.21
HPS1Q92902 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.73□□□□□ -0.21
HPS1Q92902 AL353729.2-201ENST00000605859 1249 ntBASIC13.73□□□□□ -0.21
HPS1Q92902 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.73□□□□□ -0.21
HPS1Q92902 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.73□□□□□ -0.21
HPS1Q92902 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HPS1Q92902 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HPS1Q92902 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.73□□□□□ -0.21
HPS1Q92902 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.73□□□□□ -0.21
HPS1Q92902 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.73□□□□□ -0.21
HPS1Q92902 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HPS1Q92902 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HPS1Q92902 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.73□□□□□ -0.21
HPS1Q92902 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HPS1Q92902 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.72□□□□□ -0.21
HPS1Q92902 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
HPS1Q92902 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HPS1Q92902 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.72□□□□□ -0.21
HPS1Q92902 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms