Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 SOD2-202ENST00000367054 815 ntTSL 2 BASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 RPSAP15-201ENST00000448168 861 ntBASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 IGHVIII-5-2-201ENST00000522505 261 ntBASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 AL031713.1-201ENST00000564813 661 ntBASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 AL022334.2-201ENST00000610000 484 ntBASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 AC006504.5-208ENST00000588784 2401 ntBASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNB3Q8WWL7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC22.45■■□□□ 1.19
CCNB3Q8WWL7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
CCNB3Q8WWL7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CCNB3Q8WWL7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.19
CCNB3Q8WWL7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CCNB3Q8WWL7 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 BANF1P3-201ENST00000412556 261 ntBASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 NAGK-204ENST00000443872 878 ntTSL 3 BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 DUTP3-201ENST00000450025 415 ntBASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 AP002803.1-201ENST00000528836 498 ntBASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC22.45■■□□□ 1.18
CCNB3Q8WWL7 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 PFN2-202ENST00000423691 911 ntTSL 2 BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 MIR4522-201ENST00000584932 87 ntBASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 RPL17P45-201ENST00000586289 509 ntBASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC22.44■■□□□ 1.18
CCNB3Q8WWL7 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 KRT18P9-201ENST00000604826 1300 ntBASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 DNM1P30-201ENST00000563586 452 ntBASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 AC093752.3-201ENST00000567343 901 ntBASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNB3Q8WWL7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms