Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 RN7SL828P-201ENST00000607615 303 ntBASIC12.87□□□□□ -0.35
BEST4Q8NFU0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 AC090505.1-201ENST00000430515 1834 ntBASIC12.87□□□□□ -0.35
BEST4Q8NFU0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 AL023775.1-201ENST00000454907 1746 ntBASIC12.87□□□□□ -0.35
BEST4Q8NFU0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 AL035456.1-201ENST00000456064 1369 ntBASIC12.86□□□□□ -0.35
BEST4Q8NFU0 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 AC005237.2-201ENST00000434368 219 ntBASIC12.86□□□□□ -0.35
BEST4Q8NFU0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 AL133215.2-201ENST00000609242 977 ntBASIC12.86□□□□□ -0.35
BEST4Q8NFU0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 MIR6069-201ENST00000620069 79 ntBASIC12.86□□□□□ -0.35
BEST4Q8NFU0 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
BEST4Q8NFU0 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 MCCD1P2-201ENST00000423228 335 ntBASIC12.85□□□□□ -0.35
BEST4Q8NFU0 KRT18P32-201ENST00000424695 1287 ntBASIC12.85□□□□□ -0.35
BEST4Q8NFU0 KRT18P64-201ENST00000434946 1219 ntBASIC12.85□□□□□ -0.35
BEST4Q8NFU0 TPM4P1-201ENST00000436100 807 ntBASIC12.85□□□□□ -0.35
BEST4Q8NFU0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 MTND6P24-201ENST00000440466 518 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms