Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIML2Q8N7C3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIML2Q8N7C3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIML2Q8N7C3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
TRIML2Q8N7C3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.44□□□□□ -0.1
TRIML2Q8N7C3 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIML2Q8N7C3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIML2Q8N7C3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRIML2Q8N7C3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIML2Q8N7C3 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIML2Q8N7C3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 AC044860.1-202ENST00000559481 777 ntBASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 AC092337.1-201ENST00000568699 1129 ntBASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 BTBD7P1-201ENST00000447253 1453 ntBASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIML2Q8N7C3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 AC018442.1-201ENST00000421439 2061 ntBASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIML2Q8N7C3 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms