Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC155Q8N6L0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC155Q8N6L0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC155Q8N6L0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC155Q8N6L0 AC007191.1-201ENST00000623179 2995 ntBASIC16.82■□□□□ 0.28
CCDC155Q8N6L0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC155Q8N6L0 REXO1L4P-201ENST00000605109 1937 ntBASIC16.82■□□□□ 0.28
CCDC155Q8N6L0 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CCDC155Q8N6L0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC155Q8N6L0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC155Q8N6L0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC155Q8N6L0 CICP14-201ENST00000629111 2732 ntBASIC16.82■□□□□ 0.28
CCDC155Q8N6L0 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC155Q8N6L0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC155Q8N6L0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 CU633904.3-201ENST00000624042 1029 ntBASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC155Q8N6L0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 AL133466.1-201ENST00000447582 150 ntBASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 RN7SL769P-201ENST00000469386 295 ntBASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 AC105129.2-201ENST00000559536 390 ntBASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 SAMD11P1-201ENST00000571429 661 ntBASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC155Q8N6L0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC155Q8N6L0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC155Q8N6L0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCDC155Q8N6L0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms