Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 MEP1AP4-201ENST00000423244 1087 ntBASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 AC093813.1-201ENST00000605066 256 ntBASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.98□□□□□ -0.17
CLIP4Q8N3C7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 AL645937.2-201ENST00000396808 931 ntBASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 CYMP-203ENST00000474680 1263 ntBASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 RRP7BP-205ENST00000566851 833 ntBASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.97□□□□□ -0.17
CLIP4Q8N3C7 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms