Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
DEPDC4Q8N2C3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEPDC4Q8N2C3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.93□□□□□ -0.18
DEPDC4Q8N2C3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEPDC4Q8N2C3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEPDC4Q8N2C3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEPDC4Q8N2C3 AC023090.2-201ENST00000625182 2110 ntBASIC13.93□□□□□ -0.18
DEPDC4Q8N2C3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.93□□□□□ -0.18
DEPDC4Q8N2C3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEPDC4Q8N2C3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DEPDC4Q8N2C3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEPDC4Q8N2C3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
DEPDC4Q8N2C3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DEPDC4Q8N2C3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
DEPDC4Q8N2C3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEPDC4Q8N2C3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 SPDYE17-201ENST00000412399 783 ntBASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 AL080243.2-201ENST00000418783 582 ntBASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 TARDBPP1-201ENST00000442013 1203 ntBASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 SLED1-202ENST00000512051 380 ntBASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 SDHAP3-202ENST00000515467 728 ntBASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 AC135586.1-201ENST00000539323 574 ntBASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 AL033527.5-202ENST00000641632 1098 ntBASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
DEPDC4Q8N2C3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 KRT8P22-201ENST00000562317 1415 ntBASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.91□□□□□ -0.18
DEPDC4Q8N2C3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms