Protein–RNA interactions for Protein: Q68CZ1

RPGRIP1L, Protein fantom, humanhuman

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1LQ68CZ1 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 BCAS2P2-201ENST00000425064 674 ntBASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 RPL35P9-201ENST00000446059 350 ntBASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRIP1LQ68CZ1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 RN7SKP109-201ENST00000410592 316 ntBASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 AC006987.1-201ENST00000413610 527 ntBASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 BX679664.3-201ENST00000414070 555 ntBASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 SCARNA12-201ENST00000459155 270 ntBASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 AC113935.1-201ENST00000471722 555 ntBASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 NAA40-205ENST00000539656 577 ntTSL 4 BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1LQ68CZ1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 AC067931.2-201ENST00000623655 2003 ntBASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 PAUPAR-201ENST00000630360 2965 ntBASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 SAT1-201ENST00000379251 801 ntTSL 2 BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 SAT1-202ENST00000379253 909 ntTSL 2 BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 SAT1-203ENST00000379254 868 ntTSL 3 BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 AL157792.1-201ENST00000488281 530 ntBASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 LINC00634-202ENST00000505157 222 ntBASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 RN7SL357P-201ENST00000581065 298 ntBASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 NAMA-206ENST00000605377 509 ntTSL 5 BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1LQ68CZ1 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RPGRIP1LQ68CZ1 AC018529.2-202ENST00000611482 3087 ntBASIC20.48■□□□□ 0.87
RPGRIP1LQ68CZ1 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1LQ68CZ1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1LQ68CZ1 AC023157.3-201ENST00000619086 2088 ntBASIC20.48■□□□□ 0.87
RPGRIP1LQ68CZ1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1LQ68CZ1 AL591122.2-201ENST00000624125 1853 ntBASIC20.48■□□□□ 0.87
RPGRIP1LQ68CZ1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1LQ68CZ1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RPGRIP1LQ68CZ1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC20.48■□□□□ 0.87
RPGRIP1LQ68CZ1 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
RPGRIP1LQ68CZ1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1LQ68CZ1 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC20.48■□□□□ 0.87
RPGRIP1LQ68CZ1 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms