Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 AC007969.1-201ENST00000433675 447 ntBASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 AL355994.2-201ENST00000447882 704 ntBASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 HOMER2P2-201ENST00000451621 847 ntBASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 AC004466.1-201ENST00000599515 1080 ntBASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 AC138696.2-201ENST00000607376 223 ntBASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 AC117489.1-201ENST00000625169 3217 ntBASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
TTC39BQ5VTQ0 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.46■□□□□ 0.06
TTC39BQ5VTQ0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TTC39BQ5VTQ0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
TTC39BQ5VTQ0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 FKBP4P6-201ENST00000457486 1332 ntBASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 AL391280.1-201ENST00000506969 1062 ntBASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 AL583810.1-201ENST00000553344 1045 ntBASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TTC39BQ5VTQ0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TTC39BQ5VTQ0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TTC39BQ5VTQ0 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TTC39BQ5VTQ0 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.44■□□□□ 0.06
TTC39BQ5VTQ0 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms