Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AC068418.2-201ENST00000577309 3703 ntBASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 AC022532.1-201ENST00000624563 1728 ntBASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 AC239868.1-201ENST00000369385 493 ntBASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 MIR4754-201ENST00000582477 89 ntBASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 AL136370.1-201ENST00000608166 691 ntBASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 MEG3_2.1-201ENST00000611456 105 ntBASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RNFT1Q5M7Z0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNFT1Q5M7Z0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNFT1Q5M7Z0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RNFT1Q5M7Z0 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNFT1Q5M7Z0 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RNFT1Q5M7Z0 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RNFT1Q5M7Z0 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.27□□□□□ -0.29
RNFT1Q5M7Z0 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.27□□□□□ -0.29
RNFT1Q5M7Z0 MIR33B-201ENST00000385104 96 ntBASIC13.27□□□□□ -0.29
RNFT1Q5M7Z0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.27□□□□□ -0.29
RNFT1Q5M7Z0 FXNP2-201ENST00000411625 547 ntBASIC13.27□□□□□ -0.29
RNFT1Q5M7Z0 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms