Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 DBET-201ENST00000630918 3363 ntBASIC20.28■□□□□ 0.84
CDCA8Q53HL2 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 AC113367.3-201ENST00000508316 1912 ntBASIC20.27■□□□□ 0.84
CDCA8Q53HL2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 RCC2P8-201ENST00000502779 1035 ntBASIC20.27■□□□□ 0.84
CDCA8Q53HL2 AC003686.1-201ENST00000550956 1034 ntBASIC20.27■□□□□ 0.84
CDCA8Q53HL2 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 DRG2-220ENST00000583355 891 ntTSL 3 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC20.27■□□□□ 0.84
CDCA8Q53HL2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CDCA8Q53HL2 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDCA8Q53HL2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDCA8Q53HL2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC20.27■□□□□ 0.83
CDCA8Q53HL2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 AL390755.1-201ENST00000623716 2027 ntBASIC20.26■□□□□ 0.83
CDCA8Q53HL2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 SLC16A6P1-201ENST00000413214 1059 ntBASIC20.26■□□□□ 0.83
CDCA8Q53HL2 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 ST13P19-201ENST00000442505 1124 ntBASIC20.26■□□□□ 0.83
CDCA8Q53HL2 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 CICP24-201ENST00000605464 2705 ntBASIC20.26■□□□□ 0.83
CDCA8Q53HL2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA8Q53HL2 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 MIR769-201ENST00000390225 118 ntBASIC20.25■□□□□ 0.83
CDCA8Q53HL2 KRT18P36-201ENST00000411618 1276 ntBASIC20.25■□□□□ 0.83
CDCA8Q53HL2 DEF8-202ENST00000418391 852 ntTSL 2 BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 AC005077.2-201ENST00000449786 690 ntBASIC20.25■□□□□ 0.83
CDCA8Q53HL2 ADM-202ENST00000524948 584 ntTSL 2 BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 SDHD-202ENST00000525291 790 ntTSL 3 BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 AC005586.2-201ENST00000563946 837 ntBASIC20.25■□□□□ 0.83
CDCA8Q53HL2 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms