Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 TOMM22P5-201ENST00000416399 439 ntBASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 AL627223.1-201ENST00000416693 442 ntBASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 HLA-K-203ENST00000430151 1046 ntBASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 MTND6P24-201ENST00000440466 518 ntBASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 MIR6069-201ENST00000620069 79 ntBASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 AC090643.2-201ENST00000623442 2029 ntBASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 AGAP10P-201ENST00000454844 2418 ntBASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 MYADML-201ENST00000474610 2147 ntBASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 SPDYE7P-202ENST00000420373 878 ntBASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 TSEN15P1-201ENST00000423257 515 ntBASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 AL079307.3-201ENST00000556114 283 ntBASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 AC026150.2-201ENST00000564693 1156 ntBASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 AC011840.2-201ENST00000563063 1520 ntBASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms