Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PRICKLE4Q2TBC4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PRICKLE4Q2TBC4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.74□□□□□ -0.21
PRICKLE4Q2TBC4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.74□□□□□ -0.21
PRICKLE4Q2TBC4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PRICKLE4Q2TBC4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PRICKLE4Q2TBC4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 E2F3P2-201ENST00000447755 1422 ntBASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 AC009093.10-201ENST00000641956 1442 ntBASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 RN7SL832P-201ENST00000607781 1756 ntBASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 FAM21FP-201ENST00000426241 1131 ntBASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 BNIP3P42-201ENST00000454982 569 ntBASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 SORD2P-201ENST00000558556 1069 ntBASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 DUX4L46-201ENST00000566845 751 ntBASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 EEF1DP1-201ENST00000585891 896 ntBASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 AC132192.2-201ENST00000596206 1147 ntBASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 AC010328.2-201ENST00000597698 1111 ntBASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 BNIP3P29-201ENST00000598302 571 ntBASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 AC011447.5-201ENST00000616168 564 ntBASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.73□□□□□ -0.21
PRICKLE4Q2TBC4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRICKLE4Q2TBC4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms