Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 VDAC1P1-201ENST00000439229 848 ntBASIC19.13■□□□□ 0.65
CCDC27Q2M243 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 CYP4F23P-201ENST00000593402 1579 ntBASIC19.13■□□□□ 0.65
CCDC27Q2M243 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC27Q2M243 INTS4P1-203ENST00000641008 3683 ntBASIC19.12■□□□□ 0.65
CCDC27Q2M243 AL009178.2-201ENST00000597278 2719 ntBASIC19.12■□□□□ 0.65
CCDC27Q2M243 AC144522.1-201ENST00000625111 1658 ntBASIC19.12■□□□□ 0.65
CCDC27Q2M243 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC27Q2M243 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC27Q2M243 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC27Q2M243 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC27Q2M243 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC27Q2M243 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC27Q2M243 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CCDC27Q2M243 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC27Q2M243 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC27Q2M243 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.12■□□□□ 0.65
CCDC27Q2M243 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC27Q2M243 AC003686.1-201ENST00000550956 1034 ntBASIC19.12■□□□□ 0.65
CCDC27Q2M243 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC27Q2M243 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC27Q2M243 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC27Q2M243 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.12■□□□□ 0.65
CCDC27Q2M243 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC27Q2M243 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC27Q2M243 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC27Q2M243 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC27Q2M243 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC27Q2M243 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC27Q2M243 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC27Q2M243 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC27Q2M243 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC27Q2M243 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC27Q2M243 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC27Q2M243 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC27Q2M243 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC27Q2M243 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC27Q2M243 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 AC012617.1-204ENST00000586340 2305 ntBASIC19.11■□□□□ 0.65
CCDC27Q2M243 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC27Q2M243 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC27Q2M243 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC27Q2M243 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC27Q2M243 AC006122.1-201ENST00000493323 440 ntBASIC19.11■□□□□ 0.65
CCDC27Q2M243 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 FAM8A2P-201ENST00000528813 1142 ntBASIC19.11■□□□□ 0.65
CCDC27Q2M243 RBM8B-201ENST00000555532 525 ntBASIC19.11■□□□□ 0.65
CCDC27Q2M243 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 PCBP2-OT1-201ENST00000634357 590 ntBASIC19.11■□□□□ 0.65
CCDC27Q2M243 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC27Q2M243 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC27Q2M243 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC27Q2M243 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC27Q2M243 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC27Q2M243 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC27Q2M243 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms