Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 IGHV3-72-202ENST00000621503 303 ntBASIC13.08□□□□□ -0.32
SEC61A1P61619 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SEC61A1P61619 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.08□□□□□ -0.32
SEC61A1P61619 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.08□□□□□ -0.32
SEC61A1P61619 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.08□□□□□ -0.32
SEC61A1P61619 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.08□□□□□ -0.32
SEC61A1P61619 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SEC61A1P61619 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SEC61A1P61619 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
SEC61A1P61619 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.08□□□□□ -0.32
SEC61A1P61619 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.08□□□□□ -0.32
SEC61A1P61619 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.08□□□□□ -0.32
SEC61A1P61619 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
SEC61A1P61619 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
SEC61A1P61619 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC61A1P61619 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.07□□□□□ -0.32
SEC61A1P61619 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.07□□□□□ -0.32
SEC61A1P61619 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SEC61A1P61619 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SEC61A1P61619 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC61A1P61619 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SEC61A1P61619 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SEC61A1P61619 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SEC61A1P61619 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SEC61A1P61619 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SEC61A1P61619 AC098614.1-201ENST00000368528 745 ntBASIC13.07□□□□□ -0.32
SEC61A1P61619 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SEC61A1P61619 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.07□□□□□ -0.32
SEC61A1P61619 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
SEC61A1P61619 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC61A1P61619 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.07□□□□□ -0.32
SEC61A1P61619 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC61A1P61619 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 RN7SL399P-201ENST00000471648 279 ntBASIC13.07□□□□□ -0.32
SEC61A1P61619 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.07□□□□□ -0.32
SEC61A1P61619 RRP7BP-205ENST00000566851 833 ntBASIC13.07□□□□□ -0.32
SEC61A1P61619 AC036164.1-201ENST00000570544 333 ntBASIC13.07□□□□□ -0.32
SEC61A1P61619 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.07□□□□□ -0.32
SEC61A1P61619 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC61A1P61619 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC61A1P61619 WFDC1-204ENST00000613603 549 ntBASIC13.07□□□□□ -0.32
SEC61A1P61619 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SEC61A1P61619 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
SEC61A1P61619 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC61A1P61619 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC61A1P61619 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.07□□□□□ -0.32
SEC61A1P61619 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 Z82170.1-201ENST00000625081 3192 ntBASIC13.07□□□□□ -0.32
SEC61A1P61619 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SEC61A1P61619 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC61A1P61619 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC61A1P61619 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SEC61A1P61619 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SEC61A1P61619 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.07□□□□□ -0.32
SEC61A1P61619 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.06□□□□□ -0.32
SEC61A1P61619 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SEC61A1P61619 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.06□□□□□ -0.32
SEC61A1P61619 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SEC61A1P61619 AP001267.2-201ENST00000532619 2086 ntBASIC13.06□□□□□ -0.32
SEC61A1P61619 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.06□□□□□ -0.32
SEC61A1P61619 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SEC61A1P61619 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms