Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
AP3S2P59780 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.76□□□□□ -0.37
AP3S2P59780 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
AP3S2P59780 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
AP3S2P59780 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.76□□□□□ -0.37
AP3S2P59780 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
AP3S2P59780 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.76□□□□□ -0.37
AP3S2P59780 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
AP3S2P59780 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
AP3S2P59780 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.76□□□□□ -0.37
AP3S2P59780 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
AP3S2P59780 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.76□□□□□ -0.37
AP3S2P59780 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
AP3S2P59780 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
AP3S2P59780 SPDYE17-201ENST00000412399 783 ntBASIC12.76□□□□□ -0.37
AP3S2P59780 TFAMP1-201ENST00000412727 736 ntBASIC12.76□□□□□ -0.37
AP3S2P59780 AC098831.1-202ENST00000438821 336 ntBASIC12.76□□□□□ -0.37
AP3S2P59780 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.76□□□□□ -0.37
AP3S2P59780 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
AP3S2P59780 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.76□□□□□ -0.37
AP3S2P59780 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.76□□□□□ -0.37
AP3S2P59780 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.76□□□□□ -0.37
AP3S2P59780 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
AP3S2P59780 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
AP3S2P59780 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
AP3S2P59780 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
AP3S2P59780 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
AP3S2P59780 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.76□□□□□ -0.37
AP3S2P59780 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
AP3S2P59780 AC011481.3-201ENST00000623895 5594 ntBASIC12.76□□□□□ -0.37
AP3S2P59780 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
AP3S2P59780 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.76□□□□□ -0.37
AP3S2P59780 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
AP3S2P59780 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S2P59780 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.76□□□□□ -0.37
AP3S2P59780 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
AP3S2P59780 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
AP3S2P59780 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.75□□□□□ -0.37
AP3S2P59780 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
AP3S2P59780 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.75□□□□□ -0.37
AP3S2P59780 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.75□□□□□ -0.37
AP3S2P59780 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
AP3S2P59780 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
AP3S2P59780 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
AP3S2P59780 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
AP3S2P59780 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
AP3S2P59780 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.75□□□□□ -0.37
AP3S2P59780 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.75□□□□□ -0.37
AP3S2P59780 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S2P59780 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
AP3S2P59780 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.75□□□□□ -0.37
AP3S2P59780 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
AP3S2P59780 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.75□□□□□ -0.37
AP3S2P59780 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.75□□□□□ -0.37
AP3S2P59780 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.75□□□□□ -0.37
AP3S2P59780 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.75□□□□□ -0.37
AP3S2P59780 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms