Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
WNT3P56703 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
WNT3P56703 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14□□□□□ -0.17
WNT3P56703 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
WNT3P56703 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
WNT3P56703 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
WNT3P56703 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
WNT3P56703 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14□□□□□ -0.17
WNT3P56703 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14□□□□□ -0.17
WNT3P56703 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14□□□□□ -0.17
WNT3P56703 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.99□□□□□ -0.17
WNT3P56703 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
WNT3P56703 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 AC089987.1-201ENST00000551654 2209 ntBASIC13.99□□□□□ -0.17
WNT3P56703 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.99□□□□□ -0.17
WNT3P56703 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
WNT3P56703 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.99□□□□□ -0.17
WNT3P56703 HSPA8P5-201ENST00000456928 2069 ntBASIC13.99□□□□□ -0.17
WNT3P56703 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 AL138709.1-201ENST00000614840 1693 ntBASIC13.99□□□□□ -0.17
WNT3P56703 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.99□□□□□ -0.17
WNT3P56703 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.99□□□□□ -0.17
WNT3P56703 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.99□□□□□ -0.17
WNT3P56703 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.99□□□□□ -0.17
WNT3P56703 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.99□□□□□ -0.17
WNT3P56703 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.99□□□□□ -0.17
WNT3P56703 AC009486.1-201ENST00000569860 813 ntBASIC13.99□□□□□ -0.17
WNT3P56703 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.99□□□□□ -0.17
WNT3P56703 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.99□□□□□ -0.17
WNT3P56703 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
WNT3P56703 AC138466.3-201ENST00000619983 221 ntBASIC13.99□□□□□ -0.17
WNT3P56703 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.99□□□□□ -0.17
WNT3P56703 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.99□□□□□ -0.17
WNT3P56703 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
WNT3P56703 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.99□□□□□ -0.17
WNT3P56703 AL590440.2-201ENST00000641973 1595 ntBASIC13.99□□□□□ -0.17
WNT3P56703 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.99□□□□□ -0.17
WNT3P56703 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.99□□□□□ -0.17
WNT3P56703 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.99□□□□□ -0.17
WNT3P56703 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
WNT3P56703 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
WNT3P56703 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
WNT3P56703 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.98□□□□□ -0.17
WNT3P56703 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
WNT3P56703 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
WNT3P56703 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.98□□□□□ -0.17
WNT3P56703 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.98□□□□□ -0.17
WNT3P56703 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.98□□□□□ -0.17
WNT3P56703 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.98□□□□□ -0.17
WNT3P56703 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 ANKRD19P-201ENST00000338192 862 ntBASIC13.98□□□□□ -0.17
WNT3P56703 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
WNT3P56703 AC234783.1-201ENST00000441761 496 ntBASIC13.98□□□□□ -0.17
WNT3P56703 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.98□□□□□ -0.17
WNT3P56703 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 TMEM198B-204ENST00000484016 896 ntBASIC13.98□□□□□ -0.17
WNT3P56703 AC119751.2-201ENST00000504529 210 ntBASIC13.98□□□□□ -0.17
WNT3P56703 USP32P1-208ENST00000506594 1164 ntBASIC13.98□□□□□ -0.17
WNT3P56703 AL391280.1-201ENST00000506969 1062 ntBASIC13.98□□□□□ -0.17
WNT3P56703 TDH-203ENST00000531764 1110 ntBASIC13.98□□□□□ -0.17
WNT3P56703 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
WNT3P56703 MIR5189-201ENST00000577370 114 ntBASIC13.98□□□□□ -0.17
WNT3P56703 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.98□□□□□ -0.17
WNT3P56703 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.98□□□□□ -0.17
WNT3P56703 MIR6775-201ENST00000617557 69 ntBASIC13.98□□□□□ -0.17
WNT3P56703 MIR6752-201ENST00000618442 71 ntBASIC13.98□□□□□ -0.17
WNT3P56703 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.98□□□□□ -0.17
WNT3P56703 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.98□□□□□ -0.17
WNT3P56703 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
WNT3P56703 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms